Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01826 ATGGCCTCGGCCTCGCAAGCAGTGCAGTTGCGTATCGAAGACAATCTAGTGATTATGGACAATGGCATCCTGCAAGTGTATTTATCCAATCCAGGTGGATTAGTCACCAGAATACAATACAATGGAATTGATAATCTGCTTGAAGTTCTTAGTGGAAGTGAGCATAGAGGGTATTGGGACGTTGTTTGGAGTGAAGCCGGAAGTACAGGAACAGCTGGGACATTTGAACGGTATGTGATGCTTCGTAATTCCTCAGGATTCTACTCCTACGCCATCTTTGAACACCTAGCAGAGTGGCCTGCTTTCAACATACCTCAAATAAGGATTGTTTATAAGCTTCGAAAAGATAATTTTCATTACATGGCCGTGTCGGATGATAGACAAAGATTTATGCCTCTCCCAGACGACAGATTACCCGGAAGAGGAAAAGAACTAGTTCCGCCGGAGGCAGTTTTGCTCGTTAATCAAGTGGAACCAGAGTTCAAGGGAGAGGGATACCAATTTTGGACTAGAGCTAACGAGAAAGGCTACTTCTCAATCAATAATATATGCGGTGGGGATTACAATCTCTATGCATGGGTTCAAGGTTTCATTGGAGAATATTGGAACAATATTGTTCTCGCCATAACACCAGGTTAG 639 0.4335 MASASQAVQLRIEDNLVIMDNGILQVYLSNPGGLVTRIQYNGIDNLLEVLSGSEHRGYWDVVWSEAGSTGTAGTFERYVMLRNSSGFYSYAIFEHLAEWPAFNIPQIRIVYKLRKDNFHYMAVSDDRQRFMPLPDDRLPGRGKELVPPEAVLLVNQVEPEFKGEGYQFWTRANEKGYFSINNICGGDYNLYAWVQGFIGEYWNNIVLAITPG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 6 77 - -
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 77 164 - -
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 165 212 - -
Gma14g01826 212 Pfam Rhamnogalacturonate lyase family 76 164 IPR010325 -
Gma14g01826 212 Pfam Rhamnogalacturonate lyase family 3 70 IPR010325 -
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 165 212 - -
Gma14g01826 212 SUPERFAMILY Starch-binding domain-like 159 203 IPR013784 GO:0030246
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 77 164 - -
Gma14g01826 212 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 6 77 - -
Gma14g01826 212 Pfam Polysaccharide lyase family 4, domain II 150 203 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01826 Gma-Chr14 48759737 48771163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01826 166 212 Polysaccharide Lyase AT1G09890 57.447 1.91e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01826 K18195 - gmx:100789751 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01826 14 48759737 48771163 Gma14g01826 14 48759737 48771163 ECH
Gma14g01826 14 48759737 48771163 Gma02g02052 02 46170413 46176365 GST