Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01809 ATGGTCCCGTTTCGGAGATTCTACGGCTTCGAGCGCTGGCTGGACCACCACGCTGCCCACTCTCCGATGGAGTTGAACGCTGCCAGATCCAAAACGGAGCGGAAATCGACGGAAGCGTGCAAGAGTCACAGGGAAGCTGAGAGGAGACGCAGGCAGAGAATCAACTCTCACCTCTCCACCTTACGTTCCCTCCTTCCTAACGCCGCCAAGTCGGACAAGGCGTCGTTGCTGGGGGAAGTGGTGGAGCACGTGAAGCGGCTGAGGAAGCAGGCCGATGACGTGGCGCGCGGGGACTCGTCGTCCTCCTCGAGAAGCGCTCAGCCGGGTTCGGTCCGGTCGGAGGCGTGGCCGTTTCCGGGAGAGTGCGACGAGGCGACGGTGAGTTTCTGCGACGGCGGCGAACCGAAGCGGGTGAAGGCGACGGTGTGCTGCGAGGACCGGGCCGGTCTGAACCGGGAAGTGGGGCAGGTGATCCGGTCGGTTCGGGCAAAACCGGTTCGCGCGGAGACGATGACGGTTGGGGGAAGAACGAAGAGTGTTGTGGTGGTGGAGTGGGAAAAGGAAGAGGAGGTTGGGGCGCTGGAGCGGGCTTTGAGGGCTGTGGTGGAGAATCGGGCTTTGGTGGGCTTTGGAATGGGCCAAGTCTTTGTGGGCCAGAAACGGGGTAGGGATTGTTGTGAGGTCGACTCTGACTTCTTGCTGAGGAATGGGAGCTTCTGCTAA 723 0.6183 MVPFRRFYGFERWLDHHAAHSPMELNAARSKTERKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLGEVVEHVKRLRKQADDVARGDSSSSSRSAQPGSVRSEAWPFPGECDEATVSFCDGGEPKRVKATVCCEDRAGLNREVGQVIRSVRAKPVRAETMTVGGRTKSVVVVEWEKEEEVGALERALRAVVENRALVGFGMGQVFVGQKRGRDCCEVDSDFLLRNGSFC 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01809 240 MobiDBLite consensus disorder prediction 90 117 - -
Gma14g01809 240 PANTHER TRANSCRIPTION FACTOR BHLH30 16 223 IPR045847 GO:0003700|GO:0006355
Gma14g01809 240 MobiDBLite consensus disorder prediction 27 50 - -
Gma14g01809 240 SUPERFAMILY ACT-like 138 203 IPR045865 -
Gma14g01809 240 MobiDBLite consensus disorder prediction 25 50 - -
Gma14g01809 240 Gene3D - 31 95 IPR036638 GO:0046983
Gma14g01809 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 96 IPR036638 GO:0046983
Gma14g01809 240 MobiDBLite consensus disorder prediction 96 110 - -
Gma14g01809 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 38 87 IPR011598 GO:0046983
Gma14g01809 240 PANTHER OS09G0463900 PROTEIN 16 223 - -
Gma14g01809 240 Pfam Helix-loop-helix DNA-binding domain 40 87 IPR011598 GO:0046983
Gma14g01809 240 SMART finulus 44 93 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01809 Gma-Chr14 48496420 48497262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01809 28 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.957 1.73e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma14g01809 HLH 6.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01809 - - gmx:100782838 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01809 14 48496420 48497262 Gma14g01809 14 48496420 48497262 ECH
Gma14g01809 14 48496420 48497262 Gma02g02028 02 45852668 45853994 GST