Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01791 ATGGAATTCGACGAGCAAGAGGAGCATGAGGAGGAGGAAATGGTGATGCCGGAGCCGGCGGCGGTATCGGCGCCGCCGAGTTACGACTCGCTCGGGAACTCCGGGGCGATGTCGAAACTTGGCGGCGGCGAGGGGCGGAAGACCGCGCTCGGCGCCGCGGCGGCGGCGGTGCGGTACCGAGAATGCCAGAAGAACCACGCCGTGAGCTTCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTCATGGCGGCCGGAGAGGACGGCACGCTGGAGGCCGTCATCTGCGCTGCCTGCAACTGCCACCGGAATTTCCACCGCAAGGAGATCGACGGCGAGATTACCTCCTTCCACTACCGTGCACAGCCTCCCCCGCCGCCGATGCACCACCACCACCAATTCTCCCCGTACTACCACCACCGCGTCCCGCAGCACCCCGCCGCCGCTGGCTACCTCCACCACCACCTCACACCTCCGATGTCGCAGCACCGCCCGCTCGCCCTCCCGGCCGCAGCCTCCGGCGGCGGCCTAAGCCGCGAAGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGTGGCGGTGGATCCAAAAAACGGTTCCGAACGAAGTTCACGCAGGAACAAAAGGATAAGATGCTCGCATTCGCGGAACAACTAGGGTGGAGAATCCAGAAGCACGATGAATCTGCTGTGGAACAGTTCTGTGCTGAGACCAATGTGAAGCGAAACGTTCTCAAAGTTTGGATGCACAATAACAAGAGCACTCTTGGTGTGAGGGTGATTGTAGATTTCAACAACTGA 801 0.623 MEFDEQEEHEEEEMVMPEPAAVSAPPSYDSLGNSGAMSKLGGGEGRKTALGAAAAAVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGTLEAVICAACNCHRNFHRKEIDGEITSFHYRAQPPPPPMHHHHQFSPYYHHRVPQHPAAAGYLHHHLTPPMSQHRPLALPAAASGGGLSREEEDMSNPSSSGGGGGGSKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVEQFCAETNVKRNVLKVWMHNNKSTLGVRVIVDFNN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01791 266 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Gma14g01791 266 SUPERFAMILY Homeodomain-like 183 255 IPR009057 -
Gma14g01791 266 MobiDBLite consensus disorder prediction 159 199 - -
Gma14g01791 266 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Gma14g01791 266 Gene3D - 182 257 - -
Gma14g01791 266 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Gma14g01791 266 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 49 257 - -
Gma14g01791 266 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 49 257 - -
Gma14g01791 266 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 197 253 IPR006455 -
Gma14g01791 266 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01791 Gma-Chr14 48217773 48221303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01791 1 256 ZF-HD Transcription Factor Family AT4G24660 52.734 2.11e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma14g01791 ZF-HD_dimer 6.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01791 - - gmx:100776421 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01791 14 48217773 48221303 Gma14g01791 14 48217773 48221303 ECH
Gma14g01791 14 48217773 48221303 Gma02g02010 02 45585873 45592092 GST
Gma14g01791 14 48217773 48221303 Gma04g00853 04 8391932 8393244 PCT
Gma14g01791 14 48217773 48221303 Gma06g00842 06 7773794 7775591 PCT
Gma04g00853 04 8391932 8393244 Gma14g01791 14 48217773 48221303 PCT
Gma06g00842 06 7773794 7775591 Gma14g01791 14 48217773 48221303 PCT