Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01780 ATGGGCATCCACACGGATTGCCCTGCACCAGCACCATTGTCGATGAATTTGGATCATGCTCGTGCTTGTGTTCTTCTTCTTATTTTTCTTATGCCGTCTGCTACGGCACAGTTACAAAACTCGCCGCCACCGCCACCGTTGGATCCTTTCACGAGGTTAAGGTTCGACAAGACCATGGCTGCGGTTTTGGTAATCCTCGTAGTGGTTTTCTTCGCGTTTGGGTTTGTTTCTATCTACACGCGCCAATGCGCGGAGAGGAGGATCAGAGGGAGGCTCGACCTGGCGGTGGCGATCGCCGGCGGGATGGAGCGCCGGCAGCACCGCGGCCTCGACGCGGCGGTGGTAGAGACGTTCCCGACCTTCGTGTACTTCGAGGTTAAGGCACTGAAGATCGGAAGGGCCACGCTGGAATGCGCCGTGTGCCTCAACGAGTTCCGCGACGACGAAACGCTGCGTTTGATCCCCAAGTGCTGCCACGTGTTCCACTCCGATTGCATCGACGCGTGGCTGGCGAATCACTCCACTTGTCCCGTTTGCCGCGCCAACCTCGCGCCCAAGCCCGAGGACGCGCCATCTTCCGTTGAGATTCAGCTTTCAGATCCGGCCCGGCCCATTGGGCCCAATGAGCCCGGTCATGATCCGAATTACATCAACCCGGTGGAGGAGCGCGAAGGTGAACAAAACAGAATCGTTACGGAGCCTCCACGTGTTTTAGATGATCCCAACCGGGCCCGTCCGGTTCGGTCTAAATCGACCGGGTTTGGCATTGCAAGGCTGTTTCCGCGATCTCACTCGACGGGTCACTCGTTGGTTCGACCGGGTGAGGATTGTGAGCGGTTCACGCTGCGGTTGCCGGAAGAGGTGCGGGACCGGCTCGTGCGATCCGCGACGCTGAACCGGACGAAGAGTTGCGGGATGACATGGCAGCTGGAGAGCAGCGAGAGAAGGGGTTACCGGACGGGGAGTGTGGGGAGGTACGAGCGGTTCGGTGGGGGAGGGCCGGTTGGACCGGTGGGGTTCATGTGGACCCCACCGTTTTGGGGTAGGACCGGTTCGGTGAAGTCACCTAAGGCAACAAGGGTGAAGGATGAAGTTGACGCGGGAGAACGTTCCTCTGATCGTTTGTTTTCCAAGGATTGA 1140 0.5895 MGIHTDCPAPAPLSMNLDHARACVLLLIFLMPSATAQLQNSPPPPPLDPFTRLRFDKTMAAVLVILVVVFFAFGFVSIYTRQCAERRIRGRLDLAVAIAGGMERRQHRGLDAAVVETFPTFVYFEVKALKIGRATLECAVCLNEFRDDETLRLIPKCCHVFHSDCIDAWLANHSTCPVCRANLAPKPEDAPSSVEIQLSDPARPIGPNEPGHDPNYINPVEEREGEQNRIVTEPPRVLDDPNRARPVRSKSTGFGIARLFPRSHSTGHSLVRPGEDCERFTLRLPEEVRDRLVRSATLNRTKSCGMTWQLESSERRGYRTGSVGRYERFGGGGPVGPVGFMWTPPFWGRTGSVKSPKATRVKDEVDAGERSSDRLFSKD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01780 379 PANTHER RING-H2 FINGER PROTEIN ATL11 25 312 - -
Gma14g01780 379 PANTHER RING FINGER DOMAIN-CONTAINING 25 312 - -
Gma14g01780 379 Pfam Ring finger domain 137 180 IPR001841 -
Gma14g01780 379 MobiDBLite consensus disorder prediction 356 379 - -
Gma14g01780 379 SMART ring_2 138 179 IPR001841 -
Gma14g01780 379 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Gma14g01780 379 CDD RING-H2_PA-TM-RING 137 180 - -
Gma14g01780 379 SUPERFAMILY RING/U-box 125 190 - -
Gma14g01780 379 MobiDBLite consensus disorder prediction 348 379 - -
Gma14g01780 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 186 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01780 Gma-Chr14 47934137 47935276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01780 18 370 Rapid Response to Elicitors AT3G05200 41.600 1.04e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01780 K10664 - gmx:100815982 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01780 14 47934137 47935276 Gma14g01780 14 47934137 47935276 ECH
Gma14g01780 14 47934137 47935276 Gma02g01999 02 45448221 45449345 GST
Gma14g01780 14 47934137 47935276 Gma04g02179 04 52231260 52231963 PCT
Gma14g01780 14 47934137 47935276 Gma06g00888 06 8199024 8200644 PCT
Gma04g02179 04 52231260 52231963 Gma14g01780 14 47934137 47935276 PCT
Gma06g00888 06 8199024 8200644 Gma14g01780 14 47934137 47935276 PCT