Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01777 ATGAGCATGCAAAAGGAGAGTCCTCTTATTAGACTCCACAGTTTCGACCAAGGCCATGCATGGCTAGCTCTACTGCACCTTCTCATTCACATCTCACCGGCAGTAACCGGTCAGCCGGTAACCCCGCCGGTGCAACCCGACAGCAACAAATCCGTGATCGCCATCATGGCCATCGTGGTCATCATGTTCCTCATCTCAGCCTTCCTCTCCCTCTACTCCCGCAAGTGCTCCGACCGGCCGGTCCAGACACGTGGCATCCTCGACCTCGCGGGCCCCACGGGCGCAGCCGGTAACCCGTTGCAAGCCGAATCCAACGGCCTCAATCAAGCCACCATAGAAACGTTCCCAACTTTCCTCTACGCCGACGTGAAGGGTCTCAAGATTGGAAAAGACACGCTTGCATGCGCGGTGTGCTTGAACGAGTTCGAAGACAACGACACCCTCCGCATGATCCCCAAATGCTGCCACGTGTACCACCCCGATTGCATTGGTGCGTGGTTAGCCTCTCATTCCACGTGCCCGGTGTGTCGTGCCAACCTTGTTCCACAACCAGAAGACATGAACACGAACACGAACACGAACATGCCTTCAATCTTGTCCATTCAGATACCCAATGAAGAAGAACGTGAACATGAACATGAACATGAATACGAGGCTGTTATTGTTGGTGAGCAACATAAGAGAGATGTTGACGTGGAGTCACCGAAGGTGGATTTACTTCGGAGGATTCGAACGTTGCACCATGATCATCAGAGCCGTCCATCGAGGTCGAAGTCGACGGGGTTCTTGTCTTCGCTCTTGTTTCCGAGATCAAACTCGATGGGGCAATTGGCGCAGCATGCTGGGGAGAACTATGAGAGGTTTACGCTAAGGTTACCCGAGGAGGTACTACGGAGCCAGATGGTGCTGAAGCGTGCGAATAGCTGCGTGTGCTTTACGAGGATGAGTAGTGGCACGTGGGGGTATAGGACGAGAAGCGTGGGGAGAGGGTGTGTGCAGTACGAGAGGTTTGGTGGTGAGAATGAACAGTGGGGTTTCACTTTGACGCCGCCAAGTCTCGTTAGGAACAGTTGGAATAATAATAGATCAACGAGAAAATCACCGGTTCAGCGTTCGGGTGTGGCGTTGGATAATAATAATGCTGGTGAGAGATCCACTGAATTCTTGCGTCTTGGGTAG 1179 0.5293 MSMQKESPLIRLHSFDQGHAWLALLHLLIHISPAVTGQPVTPPVQPDSNKSVIAIMAIVVIMFLISAFLSLYSRKCSDRPVQTRGILDLAGPTGAAGNPLQAESNGLNQATIETFPTFLYADVKGLKIGKDTLACAVCLNEFEDNDTLRMIPKCCHVYHPDCIGAWLASHSTCPVCRANLVPQPEDMNTNTNTNMPSILSIQIPNEEEREHEHEHEYEAVIVGEQHKRDVDVESPKVDLLRRIRTLHHDHQSRPSRSKSTGFLSSLLFPRSNSMGQLAQHAGENYERFTLRLPEEVLRSQMVLKRANSCVCFTRMSSGTWGYRTRSVGRGCVQYERFGGENEQWGFTLTPPSLVRNSWNNNRSTRKSPVQRSGVALDNNNAGERSTEFLRLG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01777 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 183 IPR013083 -
Gma14g01777 392 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Gma14g01777 392 SMART ring_2 135 176 IPR001841 -
Gma14g01777 392 MobiDBLite consensus disorder prediction 356 379 - -
Gma14g01777 392 PANTHER RING FINGER DOMAIN-CONTAINING 1 330 - -
Gma14g01777 392 Pfam Ring finger domain 134 177 IPR001841 -
Gma14g01777 392 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 330 - -
Gma14g01777 392 SUPERFAMILY RING/U-box 129 187 - -
Gma14g01777 392 CDD RING-H2_PA-TM-RING 135 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01777 Gma-Chr14 47888586 47889764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01777 22 390 Rapid Response to Elicitors AT3G05200 34.026 1.83e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01777 K10664 - gmx:100814384 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01777 14 47888586 47889764 Gma02g01998 02 45432939 45434290 GST