Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01774 ATGGCCCTAGAGGCCGTGGTTTTCCCACAAGATCCATTCACTTACGGTTGCAACAACAAAGACTTCTTGTACTCGTTAGTAGGAGGTGGTGGAGGAAGCCAAACCCATGTGGGAATCATCAACAACAACAACATAGACCACACCCTGCATGCAAATTGGGATTCATCTTCTCCTTCGGTGTTGCAAAATGTTAAAGACCAGTGGGATTCACACTCCTCCCCTGAAGCTTGCACTGTTGATCAATCCCTTCCTGCAGTCTTCCCTCCTCCTTCTTCCTCGGCCGAAGCCGCTGCCATGGGCCGCCACAAACGACGTCGCACCAAGAGCGCCAAGAACAAGGAGGAGATCGAGAACCAGAGGATGACCCACATTGCAGTTGAGCGCAATAGAAGAAAACAGATGAACGAGTACCTCGCCGTGCTTAGATCCTTGATGCCTCCTTCTTATGTACAAAGGGGCGATCAAGCATCTATTATTGGGGGCGCCATTAACTTCGTGAAGGAGCTGGAGTGGCTTCTGCAGTGCATGAAGGGCCAGAAGAGAACAAAGGAGGGTGGCTTCTCTGACTCATCACCCTTTGCTGAGTTCTTCATGTTCCCCCAATACTCGACACGTGCGACACAGAGCAGCAGCAGCAGCAGCAGAGGCTACCCTGGCACGTGCGAGGCCAACAACAACATTGCACGGAACCATTCATGGGCCGTGGCAGACATAGAAGTGACCTTGGTAGATGGCCATGCCAACATGAAGATACTCTCAAAGAAACGACCAGGGTTGCTTCTGAAGATGGTTGTTGGTCTTCAAAGTCTTGGTCTCAGCATTCTTCACCTTAATGTTACCACTGTTGACGATATGGTCCTTACCTCAGTTAGTGTTAAGGTAGAGGAAGGGTGTCAGCTGAACACGGTGGATGAAATTGCAGCTGCTGTGCATCAATTATCACGCACAGTTCAGGAGGAAGCTGTTTTCAGCTGA 975 0.5026 MALEAVVFPQDPFTYGCNNKDFLYSLVGGGGGSQTHVGIINNNNIDHTLHANWDSSSPSVLQNVKDQWDSHSSPEACTVDQSLPAVFPPPSSSAEAAAMGRHKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEWLLQCMKGQKRTKEGGFSDSSPFAEFFMFPQYSTRATQSSSSSSRGYPGTCEANNNIARNHSWAVADIEVTLVDGHANMKILSKKRPGLLLKMVVGLQSLGLSILHLNVTTVDDMVLTSVSVKVEEGCQLNTVDEIAAAVHQLSRTVQEEAVFS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01774 324 CDD ACT_UUR-ACR-like 249 313 - -
Gma14g01774 324 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 323 - -
Gma14g01774 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 183 IPR036638 GO:0046983
Gma14g01774 324 CDD bHLH_AtFAMA_like 121 184 - -
Gma14g01774 324 Pfam Helix-loop-helix DNA-binding domain 119 170 IPR011598 GO:0046983
Gma14g01774 324 ProSiteProfiles ACT domain profile. 248 324 IPR002912 -
Gma14g01774 324 Gene3D - 102 184 IPR036638 GO:0046983
Gma14g01774 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 169 IPR011598 GO:0046983
Gma14g01774 324 MobiDBLite consensus disorder prediction 88 113 - -
Gma14g01774 324 PANTHER MAX DIMERIZATION, MAD 1 323 - -
Gma14g01774 324 SMART finulus 124 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01774 Gma-Chr14 47846886 47850170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01774 1 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 49.235 4.08e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma14g01774 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01774 - - gmx:100797856 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01774 14 47846886 47850170 Gma14g01774 14 47846886 47850170 ECH
Gma14g01774 14 47846886 47850170 Gma02g01997 02 45406441 45410051 GST
Gma14g01774 14 47846886 47850170 Gma04g00903 04 9055281 9057135 PCT
Gma14g01774 14 47846886 47850170 Gma06g00889 06 8217394 8219276 PCT
Gma04g00903 04 9055281 9057135 Gma14g01774 14 47846886 47850170 PCT
Gma06g00889 06 8217394 8219276 Gma14g01774 14 47846886 47850170 PCT