Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01743 ATGAATCAAAACCAGCTTCAGCCCCTTCCTCTCCTTAGTAGCTTCTTAGGTTCATCTCCTGAAGAATCTTTGCTACAAAACCAAAATGAAAATCCTAATGCATGCCATGCTCAAGTTGAGGATGTTACAGTGGCCTTACACATAGGCCTCCCTGACCATTCAAGTGGCTCCAATTCCACCAATAATCATGGATTTGTGAATGCCACAACTCAAGTTCCTAACAATTACTGGATACCAACTCAGGAGCAGATCCTCATTGGGTTTAGCCATTTCTCTTGTCCTGTGTGCCACAAAACCTTCAACCGCTACAACAACCTTCAGATGCATATGTGGGGACATGGGTCACAGTATCGCAGAGGCCCAGACTCACTGAAACGAACCCATCCACGGCCCTTGTTGGACCTTCCATGCTACTGTTGCGCAAGAGGGTGCAAGAACAACATCGAGCACGCACGTGCCAAGCCTCTGAAGGATTTTCGCACGCTTCAGACACACTACAAGAGGAAGCACGGTTCCAAGCCCTTCACGTGCCGCAAGTGTGGCAAGCCTCTGGCCGTGAAAGGTGACTGGCGAACCCACGAGAAAAACTGTGGCAAACGATGGCTTTGTATCTGTGGTTCTGATTTCAAGCATAAGAGGTCACTTAAAGACCACATAAAAGCCTTTGGATTTGGTCACACCCCTTTTTCTTCTTTTTCTGATGGTATGTAA 711 0.4726 MNQNQLQPLPLLSSFLGSSPEESLLQNQNENPNACHAQVEDVTVALHIGLPDHSSGSNSTNNHGFVNATTQVPNNYWIPTQEQILIGFSHFSCPVCHKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDLPCYCCARGCKNNIEHARAKPLKDFRTLQTHYKRKHGSKPFTCRKCGKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHTPFSSFSDGM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01743 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Gma14g01743 236 Gene3D Classic Zinc Finger 153 228 - -
Gma14g01743 236 Pfam Zinc finger, C2H2 type 91 110 IPR013087 -
Gma14g01743 236 PANTHER ZINC FINGER PROTEIN WIP2 5 231 IPR043584 GO:0003700|GO:0010468
Gma14g01743 236 SUPERFAMILY beta-beta-alpha zinc fingers 160 195 IPR036236 -
Gma14g01743 236 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 5 231 - -
Gma14g01743 236 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Gma14g01743 236 SUPERFAMILY beta-beta-alpha zinc fingers 86 113 IPR036236 -
Gma14g01743 236 SMART c2h2final6 175 195 IPR013087 -
Gma14g01743 236 SMART c2h2final6 91 113 IPR013087 -
Gma14g01743 236 Gene3D Classic Zinc Finger 90 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01743 Gma-Chr14 47280360 47282341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01743 1 231 C2H2 Transcription Factor Family AT1G34790 57.422 1.10e-99 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g01743 zf-C2H2 0.00055 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01743 - - gmx:547675 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01743 14 47280360 47282341 Gma14g01743 14 47280360 47282341 ECH