Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01742 ATGGCTTACCCGCATTACCGATCACAGTTCGGAGACACAACGTTCACTAAGGTCTTCGTTGGAGGCCTAGCTTGGGAGACTCCAACCGAAGAAATGCGCAAATATTTTGAGCAGTTTGGCGACATTCTTGAAGCTGTCATTATCACTGATAAGAGCACAGGAAAATCTAAAGGCTACGGATTCGTAACATTCCGTGATCCAGAATCAGCTAGAAGGGCATGTGCTGATCCAAACCCAGTTATAGATGGAAGAAGAGCAAATTGTAACATTGCTTCTCTAGGAAGACCTAGACCATCACCACCTAGAGGAAGAGGTACATTCCAAGGAGGAGCACCAGTGACGGCAGCAGCGTCTTACGGTGGAGTGCCGGCGGCTGGGCCGCCGGCACTGGCGCCGCCGCCACCGCCGCTAGTGTACCCGCCATATGGCTACCCTACCTACACCCCTGATTATGGGTACCACCAAGCCTCATTGTATAACCCACAAATTCAGCAACCACAATACTACCACCAACAACTCTACGGACCATCATCTTCCACCATGGGTTCCCCTTATTACTATGGCTATTCTGTGCAAGCACCAAGGGGCACATTCTCTTCAACCCAACCACATCGCATACCAGCTGGACCCTCCTATCTATACTACCCTACACCCATGGAAAGCTCTTTCTCTGCTTATCGTCCACCACCTCAATTGCAACAACTTCCAATAAGGCAACCCCCTCCTTCCCCTAGTGATTCACAGACTCAGCAGCGTGCCTCCTCCGAGACAGCAGGAGGAGTAGTTATAACTTCAGAAAGTTCAAATACCCAAGGGAGGAACTGA 825 0.503 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKSTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTFQGGAPVTAAASYGGVPAAGPPALAPPPPPLVYPPYGYPTYTPDYGYHQASLYNPQIQQPQYYHQQLYGPSSSTMGSPYYYGYSVQAPRGTFSSTQPHRIPAGPSYLYYPTPMESSFSAYRPPPQLQQLPIRQPPPSPSDSQTQQRASSETAGGVVITSESSNTQGRN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01742 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Gma14g01742 274 MobiDBLite consensus disorder prediction 244 274 - -
Gma14g01742 274 SUPERFAMILY RNA-binding domain, RBD 9 111 IPR035979 GO:0003676
Gma14g01742 274 PANTHER GEO13361P1-RELATED 1 264 - -
Gma14g01742 274 PANTHER - 1 264 - -
Gma14g01742 274 SMART rrm1_1 17 89 IPR000504 GO:0003723
Gma14g01742 274 Gene3D - 3 111 IPR012677 -
Gma14g01742 274 MobiDBLite consensus disorder prediction 223 274 - -
Gma14g01742 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Gma14g01742 274 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01742 Gma-Chr14 47250931 47255665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01742 12 92 C2H2 Transcription Factor Family AT2G19380 39.506 6.72e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01742 K25006 - gmx:100788516 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01742 14 47250931 47255665 Gma14g01742 14 47250931 47255665 ECH
Gma14g01742 14 47250931 47255665 Gma04g00927 04 9385466 9389910 PCT
Gma14g01742 14 47250931 47255665 Gma06g00910 06 8386940 8391445 PCT
Gma04g00927 04 9385466 9389910 Gma14g01742 14 47250931 47255665 PCT
Gma06g00910 06 8386940 8391445 Gma14g01742 14 47250931 47255665 PCT