Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01718 ATGACGAACCGTAATGTGAATAACACGCTTATGGAGTTGGCAATGTCGATTTCAAACAGAAGTGCTCTACCTAGAGCTGCGGTGCCTGGACTAATGGCCTTGTTTGGTGGGGTTTTGGGCCCACCCCAGAAGAAGCTCTTAAGGAAAACTTTAGAAGATGGAAGTGTTAATAAAGGAGGGAACAAAGTTATTAACACATGGATTGATTCAATGAGAGCCTCTTCTCCCACTCGATCTGCCAAATCCACACAAAACAACCAAAACCAAGACCCAACAAGTCCTTGGACTCTTTACCACCCTTCGGCACTGAGCATGTTTGATCATATTGTATGTGAGTCCAAAGGGAAGCAGATTGTGACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGATCCAGATAAAGCATACATGAGTAAAAAGATGAGGGCCACATTGAAGGACTTAGCAAGGCATTTCCCCACCGCCATAGTGAGTGGAAGGTGCCTAGACAAGGTGTATAACTTTGTAAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGAATGGACATCAAGGGACCAACAAATAAGCGAAGTACTAAGAAAGGAAACGAACAAGTGCTCTTCCAACCCGCTAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTGGAAAAAACAAAGTCTGTCCCTGGGGCTAAGGTAGAAAATAACAAGTTTTGCTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAACTGGGCATCATTGGGTGAACAAGTGAGTTTGGTGCTCAACGAGTACCCAAAACTTAAGCTAACTCAAGGGAGAAAAGTGCTTGAGATTCGACCAGCCATAAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGCTAGAGTCACTAGGATATGCTAATTCTGATAATGTATTTCCAATCTTTATTGGTGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTGCGGAGGAGGGGCCAAGGGATTGGGATTCTTGTTTCTAAAATTACAAAAGAAACCGATGCTTCCTACACTTTGCAAGATCCAACAGAGGTTGGGCAGTTTTTGAGGCATATGGTAGAGTGGAAAAGAACGAGTTCCCAATACCAGAAGTTAGATTCTAGATGA 1140 0.4333 MTNRNVNNTLMELAMSISNRSALPRAAVPGLMALFGGVLGPPQKKLLRKTLEDGSVNKGGNKVINTWIDSMRASSPTRSAKSTQNNQNQDPTSPWTLYHPSALSMFDHIVCESKGKQIVTFLDYDGTLSPIVADPDKAYMSKKMRATLKDLARHFPTAIVSGRCLDKVYNFVRLAELYYAGSHGMDIKGPTNKRSTKKGNEQVLFQPASEFLPMINEVYNILVEKTKSVPGAKVENNKFCLSVHFRCVDEKNWASLGEQVSLVLNEYPKLKLTQGRKVLEIRPAIKWDKGKALEFLLESLGYANSDNVFPIFIGDDRTDEDAFKVLRRRGQGIGILVSKITKETDASYTLQDPTEVGQFLRHMVEWKRTSSQYQKLDSR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01718 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 376 IPR044651 GO:0004805|GO:0005992
Gma14g01718 379 TIGRFAM T6PP: trehalose-phosphatase 116 364 IPR003337 GO:0003824|GO:0005992
Gma14g01718 379 Gene3D - 224 378 IPR023214 -
Gma14g01718 379 Gene3D - 118 203 IPR023214 -
Gma14g01718 379 SUPERFAMILY HAD-like 121 366 IPR036412 -
Gma14g01718 379 Pfam Trehalose-phosphatase 121 353 IPR003337 GO:0003824|GO:0005992
Gma14g01718 379 CDD HAD_TPP 121 357 - -
Gma14g01718 379 MobiDBLite consensus disorder prediction 74 94 - -
Gma14g01718 379 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 329 IPR006379 -
Gma14g01718 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01718 Gma-Chr14 46566067 46569045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01718 107 361 Trehalose Biosynthesis Gene Families AT1G70290 27.273 3.49e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01718 K01087 - gmx:100785139 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01718 14 46566067 46569045 Gma14g01718 14 46566067 46569045 ECH
Gma14g01718 14 46566067 46569045 Gma04g00955 04 9838702 9840886 PCT
Gma14g01718 14 46566067 46569045 Gma06g00934 06 8649789 8652774 PCT
Gma04g00955 04 9838702 9840886 Gma14g01718 14 46566067 46569045 PCT
Gma06g00934 06 8649789 8652774 Gma14g01718 14 46566067 46569045 PCT