Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01716 ATGGCAGCTACGATGAATTTCTACAACGGAACATCACAAGAACAAGTTGAGTCAGATCCATTCAGAGGTGAGCTCATGGAAGTTCTAGAACCTTTTATGAAAACTAGTCCTTCCTCAACAACTCCCTCTATTATTCTCTCTTCAGATTCACCTTCATCTTCATCTTTTAATTTCCCTTCCTCTTCTTTACTTTCTCCACACCCCAATTTCTACACACACACTCCCCCCCCTTCCTACTTACTCCAAAGCCAACAATCCTTAATAGGCTTTGAGCAACCACCGAGTTCCCTTCTCGGGCTCAACCACCTAAGCCCGTCTCAGATTTCTCAGATCCAGGCCCAGATCGAGGCCCAACAGAGCCAAAACCAGAACCCACACTCTCTCAACTTTCTCGGCCCGAAGCCCGTCCCAATGAAGCACGTGGGCGGGCCTCCGAAGCCCACGAAGCTGTACCGGGGCGTAAGGCAGAGGCATTGGGGGAAGTGGGTGGCGGAGATCAGGCTCCCGAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCTGCTTTGGCTTACGACAAAGCCGCGTATAGGCTCCGAGGCGACTTCGCGAGGCTGAACTTCCCGAGCCTGAAAGGCTCGTGCCCCGGGGAGGAGTACAAGCCTGTGCATTCCGCGGTGGACGCTAAGCTCGACGCGATTTGCGCCAACTTGGCGGAAATGCAGAAGCAAGGGAAGACGGAGAAAGGTGCCAGGTCAGCGAAGAAATCGAAGCAAGGTCCGAACCAGGAGGCCAAGCCCGAACCTCAAGCTTCCGCTGAAAGTGAGGGTTCTGCGGATTCTTCTCCGCTGTCTGATCTTACCTTTGATGTAACCGAGCCGCAATGGGAACATTTTAATTTGCAGAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 939 0.5272 MAATMNFYNGTSQEQVESDPFRGELMEVLEPFMKTSPSSTTPSIILSSDSPSSSSFNFPSSSLLSPHPNFYTHTPPPSYLLQSQQSLIGFEQPPSSLLGLNHLSPSQISQIQAQIEAQQSQNQNPHSLNFLGPKPVPMKHVGGPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPSLKGSCPGEEYKPVHSAVDAKLDAICANLAEMQKQGKTEKGARSAKKSKQGPNQEAKPEPQASAESEGSADSSPLSDLTFDVTEPQWEHFNLQKFPSYEIDWDSL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01716 312 SUPERFAMILY DNA-binding domain 150 207 IPR016177 GO:0003677
Gma14g01716 312 MobiDBLite consensus disorder prediction 261 287 - -
Gma14g01716 312 Pfam AP2 domain 151 199 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 MobiDBLite consensus disorder prediction 243 260 - -
Gma14g01716 312 Gene3D AP2/ERF domain 150 208 IPR036955 GO:0003700|GO:0006355
Gma14g01716 312 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 311 - -
Gma14g01716 312 SMART rav1_2 150 213 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 CDD AP2 149 207 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 PRINTS Ethylene responsive element binding protein signature 173 189 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 ProSiteProfiles AP2/ERF domain profile. 150 207 IPR001471 GO:0003700|GO:0006355
Gma14g01716 312 MobiDBLite consensus disorder prediction 241 287 - -
Gma14g01716 312 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01716 Gma-Chr14 46527958 46529317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01716 1 312 AP2-EREBP Transcription Factor Family AT1G78080 50.725 3.11e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma14g01716 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01716 K09286 - gmx:100781774 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01716 14 46527958 46529317 Gma14g01716 14 46527958 46529317 ECH
Gma14g01716 14 46527958 46529317 Gma04g00957 04 9886883 9888635 PCT
Gma14g01716 14 46527958 46529317 Gma06g00936 06 8666628 8670071 PCT
Gma04g00957 04 9886883 9888635 Gma14g01716 14 46527958 46529317 PCT
Gma06g00936 06 8666628 8670071 Gma14g01716 14 46527958 46529317 PCT