Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01690 ATGGGTCGTGTTAAACTCGAGATAAAGAGAATAGAGAACCCCACAAATCGACAAGTTACATTCTCAAAACGTAGAAATGGCCTCATCAAGAAAGCATATGAGCTATCAATCCTATGTGACATTGATATTGCTGTTATAATGTTTTCTCCATCAGGACGTCTGAACCACTTTTCCGGTAGGAGGAGGATTGAGGATGTTTTCACTCGTTACATTAATCTTCCTGATCAAGAAAGAGATAACGCTGTAAGTTTTCCTGAGCTACCCTATCGCAGGTATAATTTCAAGAATTCTCTTTATCTACTTAGGACCCTTCAGCAACTGAGGAGTGAAAATGACATAGCTCTTCAATTGGCTAATCCGGGAGACATTAACTCTGAGATTGAGGAACTCCAACAAGAAGTTAATAGGTTACAACAGCAACTTCAAATGGCCGAGGAGCAAATAAGGTTATATGAACCCGACCCATTAAAGATGTCATCTATGGCGGATCTTGAAAACAGTGAAAAACACCTTGTAGATGTCTTGACACGTGTCATACAAAGAAAGGAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTATTCAGGGGATACCGACCTCTTTCGAGAATGTAGGGTGGTTGCAGGATGGGAGTCAGAACCAAGCCCAGATTTTTGATGCATCTGCTCCTTTAGATCCTTTGAGGGACTTGTCTTCCACCATGTATGGTTCATTTTCCCAAGGGCGAAGTTCAAATGCTGATCCACGAGGCATGGGGGAGTGCCACGTGTCAAATCCAAGTGATGGGAACCTTCAAGCATGGCCTCAAGGGTACACATTGTATCCTCATCATATTCAGCATGACATGGTGGGACCCGACATGCCAGATATGATGCCACATGCGCAAGTGAACCTCCCAATCACTGCCTTGGAACCACCTAAGAATAATGAACCTGTAGAATATGACCAGTCCAAACAACCTCATCATCATTGA 984 0.4289 MGRVKLEIKRIENPTNRQVTFSKRRNGLIKKAYELSILCDIDIAVIMFSPSGRLNHFSGRRRIEDVFTRYINLPDQERDNAVSFPELPYRRYNFKNSLYLLRTLQQLRSENDIALQLANPGDINSEIEELQQEVNRLQQQLQMAEEQIRLYEPDPLKMSSMADLENSEKHLVDVLTRVIQRKEYLLSNHLSSYDPSGIQGIPTSFENVGWLQDGSQNQAQIFDASAPLDPLRDLSSTMYGSFSQGRSSNADPRGMGECHVSNPSDGNLQAWPQGYTLYPHHIQHDMVGPDMPDMMPHAQVNLPITALEPPKNNEPVEYDQSKQPHHH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01690 327 Coils Coil 120 154 - -
Gma14g01690 327 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL104 1 276 - -
Gma14g01690 327 Gene3D - 14 86 IPR036879 GO:0003677|GO:0046983
Gma14g01690 327 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 276 - -
Gma14g01690 327 MobiDBLite consensus disorder prediction 306 327 - -
Gma14g01690 327 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Gma14g01690 327 MobiDBLite consensus disorder prediction 240 259 - -
Gma14g01690 327 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Gma14g01690 327 SUPERFAMILY SRF-like 2 79 IPR036879 GO:0003677|GO:0046983
Gma14g01690 327 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01690 Gma-Chr14 45841419 45845627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01690 1 319 Type I MADS-box Gene Family AT1G22130 55.963 4.40e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Gma14g01690 SRF-TF 4.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01690 - - gmx:100305913 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01690 14 45841419 45845627 Gma14g01690 14 45841419 45845627 ECH