Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01620 ATGCTGGCTCACCCTCTTCATGCTAAGCTTCTGTCATATGATCATGATGTTGTTGTGCTGAATGATTTTAAGTATAGAAACATTGATGGTGACCTTGTTGGTGTTGTTGGAGATTCATGGGTGTTGGAAACCAATCCTATTCCTGTGACATGGAATTCTAACAAAGGTGTGGAGAAAGAGTCTTATGGCGGGATTGTCATGGCACTTTTTAAGGATGTTCAAGCGCTGAATTCTTCAACAATAGGAACAAATTCATCTTATTTCTATGAGAAGCAGGTTGGAAAGGCTGCGAGGGCCAACAAGGGGGAAGGCGGGCCCCAGAACGCCTCCTGCGAGTACCGAGGTGTTCGACAGCGAACTTGGGGCAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAGAGAACCAGGCTCTGCCTTGGTTCTTTTGCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGTCCAGATGCATACCTTAATCTCCCCCACCTGCAACCCATGTCCACTTCAACTATCATGTCAGGAAAGTTCAAATGGTTCCCTTCCAAGAACTTCATTTCAATGTTTCCTTCCTGTGGATTACTCAATGTAAAGCTCAACCTAGTGTTCATTTAA 636 0.4528 MLAHPLHAKLLSYDHDVVVLNDFKYRNIDGDLVGVVGDSWVLETNPIPVTWNSNKGVEKESYGGIVMALFKDVQALNSSTIGTNSSYFYEKQVGKAARANKGEGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLCLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLQPMSTSTIMSGKFKWFPSKNFISMFPSCGLLNVKLNLVFI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01620 211 Pfam Glycosyl hydrolase family 81 N-terminal domain 1 52 IPR040451 -
Gma14g01620 211 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Gma14g01620 211 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Gma14g01620 211 CDD AP2 111 171 IPR001471 GO:0003700|GO:0006355
Gma14g01620 211 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
Gma14g01620 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 99 206 - -
Gma14g01620 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 99 206 - -
Gma14g01620 211 Gene3D AP2/ERF domain 112 170 IPR036955 GO:0003700|GO:0006355
Gma14g01620 211 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Gma14g01620 211 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Gma14g01620 211 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01620 Gma-Chr14 42604618 42605994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01620 101 204 AP2-EREBP Transcription Factor Family AT3G57600 77.143 5.78e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma14g01620 Glyco_hydro_81 3.1e-08 CL0103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01620 - - gmx:100801311 198.749