Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01449 ATGACCGGCGAAATAGAGCAAAACGGTTGCATTTCAAAAAAACAAAGAAGGATAAGAAAGCCAGCTTCTTCTTCTTCAGCTGCTGCTGCTGCTGCTGCTTCAACTTCCCAACAAATATTTCAACACACTCTCTCATTTCTTCAATTTCCGTTACGTAAAGCCACTTTCTCAAACCTCAGTTTCCTGTTGTTGTGGTTGAAGTTGATGGAAGCTGAGGATGGAAGTAGCAACGGTGATAATGGTGAAGGGGTTGGGTTGGATCGGAGGTTGGGTTCTGAAGATGGAGATAATGGGGGGAGAATTTTAGGTGGAAGTGGTGTTGCAGAAGGCGAAGAAGATCGGGGCTTGAAGGATAGAGCTGTAAGTTATGGGGTGGCAATTGGaggtgaagaagttcaggatctgaagaaggaagctgtagataatggggtggcggttgaaggtggagatggtcttgctgaaggtgaagaagttcaggacttgaagaatgaaactgtaaataatgggatggaaactgagggtggaaatggtgttgctgaaggcgaagTTTGGACCTTGAAGAATGGCGTTAtaaatagtggggtggcaattgctgatgggagtgctgctgctgaagatggagaggtttcaggctcaaagaatgaagttaacggggtggcatttgctgatgggaatggtgttactgaacatggagaagtttggggatcaaagaatgaagctgtaaataatgaggtggcaattgttgatgggaatggtgttgcttacagtggagaagttcatggctcaaagaatggagctgtaaataatgaggtggtcattgcagatgggaatggtgttactgaaggtcaagaggatcactgcttgaagaatgaaactgttaataatgtagtggcaaatgcagatgAAGGGAACTCTGGTGCAGTTGAGTGTTTTCAAACATACAAGAGGCGCAAGCATGCAAAGTCAAGTTCAGAATTTAAAGTCCAGGAGAACAGCAGAAAACATATGGGAGCTGCAAGTCAACTGTTGGTACAGGCGGTGAAGAAACCATTTGATTTAGCTGTTGGCAACACTTCAAAAGATCATTCACATGACCATTGGGGGAATGTTGTACTAAAGCATTTATATCATTCATTAGGCAATGACAATGGTGGCATGAAGTGGTGTATAAGGGAAGCACTCATGAGCTGTCCTAAAATTAGTTGTGCCCCTACAATGAAGGAAACTCTTAAAATTGTCAAAGATGGTCAGGAGTGCTCTCCGCAATTAGAAAGTTTGTTTTATAGATTACAGAGTGAAGCTAATGGACATGAAAATGTTGTGCACAACGGATTTTCTAGTGAGTCAAATGGCCGTGATACAACTGAGGGGTGCCAGCGTGTGTTCCGCGATATCTTAGCCTCTGAAAAGTTCAGTTCATTATGTAAAGTGCTACTTGAAAATTTCCAAGGAACGAAACCTGAAACTGTATTTGACTTTAGTTTGATAAACTCAAGGATGAAGGGGCAAGCTTATGAACAATCGCCTACACTTTTCCTATCTGATGTTCAACAGGTTTGGCGAAAGCTTCAAAGTACTGGAAATCAGATTGTTGCTATGGCCAGGAGTCTCTCCAACATGTCAAAAGCTTCCTTCTGTGAGCAGGTGGGAATTTCAGCGCAGAGTTCCTTTGAAGATGAAAAGGAAGTGCTCTGTAACCAGGAATCCATCTCTCACATGAAACCAGAGCAGACAGTAGAATGTGTTGCATTCAGACTTGGCACTTGCTGGCATTGTGGAGACAAAGCAGATGGGACAGACTGTTTGGTTTGTGATTCATGTGAGGAGATGTATCATCTGTCCTGTATTGAGCCTGCTGTGAAGGAAATACCCTACAAAAGCTGGTTCTGTGCCAATTGTACTGCTAATGGAATTGGATGTCGACACAAGAATTGTGTGGTGTGTGAACGGTTGAATGCCCTGAAGACCCTGGATGATATTGTTGGTGAGGAAAACATCCCTACAAATGAGGAAACACTGAATGAATTAGAAGAGAATTCAAATTGTACTTATGATGGGATTCAAATTTCCACAGATAGGAGAAACTCATCCGACTGCAAAATTTGTAAAATGGCGGTGGATGGTGAAAAAGTAAAAATCTGTGGTCACTCTTTTTGCCCTAGTAAATACTACCATGTAAGTTGTTTGTCAAGTAAGCAGCTAAAGTCATATGGTCACTGTTGGTATTGCCCTTCTTGTATATGCCAAGTTTGCCTCACCGACAAAGATGACAATAAGATTGTACTCTGTGATGCCTGTGATCATGCATACCACGTCTACTGTATGAAACCTCCACAAAATTCTATTCCGAAAGGGAAATGGTTCTGCATAAAATGTGAGGCAGGGATACAGGCAATACGCCAGGCAAGAAAGGCGTATGAGAGTAACAAAGGGAAAGTTGGTCAGAATGATTCAAAGCCAAATGAAGATATTGACAAGAAATGGAACAAAAAGCGAGGACGGGAATTAGACAATGTTGGAGGAATGATGGACATGCTTATAACTGCTGCAAATACTCTGAATTCTGAAGAGGACTTAAATGCAATGCTGATTGACTCAAAGAAAGCATTAACATGA 2616 0.3387 MTGEIEQNGCISKKQRRIRKPASSSSAAAAAAASTSQQIFQHTLSFLQFPLRKATFSNLSFLLLWLKLMEAEDGSSNGDNGEGVGLDRRLGSEDGDNGGRILGGSGVAEGEEDRGLKDRAVSYGVAIGGEEVQDLKKEAVDNGVAVEGGDGLAEGEEVQDLKNETVNNGMETEGGNGVAEGEVWTLKNGVINSGVAIADGSAAAEDGEVSGSKNEVNGVAFADGNGVTEHGEVWGSKNEAVNNEVAIVDGNGVAYSGEVHGSKNGAVNNEVVIADGNGVTEGQEDHCLKNETVNNVVANADEGNSGAVECFQTYKRRKHAKSSSEFKVQENSRKHMGAASQLLVQAVKKPFDLAVGNTSKDHSHDHWGNVVLKHLYHSLGNDNGGMKWCIREALMSCPKISCAPTMKETLKIVKDGQECSPQLESLFYRLQSEANGHENVVHNGFSSESNGRDTTEGCQRVFRDILASEKFSSLCKVLLENFQGTKPETVFDFSLINSRMKGQAYEQSPTLFLSDVQQVWRKLQSTGNQIVAMARSLSNMSKASFCEQVGISAQSSFEDEKEVLCNQESISHMKPEQTVECVAFRLGTCWHCGDKADGTDCLVCDSCEEMYHLSCIEPAVKEIPYKSWFCANCTANGIGCRHKNCVVCERLNALKTLDDIVGEENIPTNEETLNELEENSNCTYDGIQISTDRRNSSDCKICKMAVDGEKVKICGHSFCPSKYYHVSCLSSKQLKSYGHCWYCPSCICQVCLTDKDDNKIVLCDACDHAYHVYCMKPPQNSIPKGKWFCIKCEAGIQAIRQARKAYESNKGKVGQNDSKPNEDIDKKWNKKRGRELDNVGGMMDMLITAANTLNSEEDLNAMLIDSKKALT 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01449 871 PANTHER D4, ISOFORM A 369 858 - -
Gma14g01449 871 MobiDBLite consensus disorder prediction 73 114 - -
Gma14g01449 871 ProSitePatterns Zinc finger PHD-type signature. 589 633 IPR019786 -
Gma14g01449 871 Pfam PHD-finger 747 793 IPR019787 -
Gma14g01449 871 Pfam PHD-finger 589 635 IPR019787 -
Gma14g01449 871 ProSiteProfiles Zinc finger PHD-type profile. 745 795 IPR019787 -
Gma14g01449 871 SUPERFAMILY FYVE/PHD zinc finger 586 634 IPR011011 -
Gma14g01449 871 PANTHER HISTONE ACETYLTRANSFERASE 369 858 - -
Gma14g01449 871 MobiDBLite consensus disorder prediction 1 24 - -
Gma14g01449 871 MobiDBLite consensus disorder prediction 807 831 - -
Gma14g01449 871 MobiDBLite consensus disorder prediction 816 831 - -
Gma14g01449 871 SMART PHD_3 698 747 IPR001965 -
Gma14g01449 871 SMART PHD_3 750 793 IPR001965 -
Gma14g01449 871 SMART PHD_3 588 634 IPR001965 -
Gma14g01449 871 ProSiteProfiles Zinc finger PHD-type profile. 586 636 IPR019787 -
Gma14g01449 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 752 818 IPR013083 -
Gma14g01449 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 751 IPR013083 -
Gma14g01449 871 Gene3D - 476 637 - -
Gma14g01449 871 SUPERFAMILY FYVE/PHD zinc finger 747 799 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01449 Gma-Chr14 30986475 31006836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01449 747 810 C2H2 Transcription Factor Family AT3G01460 48.438 2.84e-14 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gma14g01449 PHD 3.6e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01449 - - gmx:100810450 1636.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01449 14 30986475 31006836 Gma14g01449 14 30986475 31006836 ECH
Gma14g01449 14 30986475 31006836 Gma06g01060 06 9919139 9925546 PCT
Gma06g01060 06 9919139 9925546 Gma14g01449 14 30986475 31006836 PCT