Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01424 ATGAGAAACCCATCACTACCAACATTAGCAACAACCAAGACCAAGGTGAAGAACAATAGTAACAAAAGTACCAACAACAACAACAACATTGGTACCAACTACTCTCCATGCTGCAACAATGTTGGGTTGAAGCGAGGGCCATGGACGCCAGAGGAGGACGAGGTGTTAGCGAATTACATCAATAAAGAAGGAGAAGGACGGTGGAGAACGCTCCCGAAGCGCGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCTCCGTCAAGCGCGGCCACATCGCCCCCGACGAGGAAGATCTCATCCTCCGCCTACACCGCCTCCTGGGCAATCGGTGGTCTTTGATAGCTGGGAGGATTCCTGGAAGAACAGACAATGAAATAAAGAACTATTGGAATACCCATCTAAGTAAGAAGCTTATTAACCAAGGGATTGATCCAAGAACCCACAAGCCTCTTAACCCACCATCTATTGCCGTTCCTTCTTCTTCAACAACTTCTACTATTCCACCTTCTAAACCTCCTCCAGTGATCATCACCAACAACAACATTAACCCTTTTCATCACGATCTCACCAACATGTTTAACCAAGGAGTTCATCTTAATCATCTAGGTCAACATCACCAACCTCCTCCACTTTCTAATCCCTGTGATAACCATAACCCAGTACCAGCTGCTGCCACCGATGATGTTTCTGCAATGGGTTTCATGGACAACAACAACGAGGATTGCAACAACGATGGTATCAACATCAATTATTACTCCGACGATGTCTTTTCTTCCTTCCTCAACTCTTTGATCAACGATGATGCTTTTGAGGCGCAGCAGCAGCAGCACCACGTGCAAACAGAGATCCCCACACCCAGTGAGCGTAGCATTAATCCACTGCCATGTGATGATCGTGTCGATGATCATCATCTGGGTTCAATCACCACTGCTTCTGCATCGCAAGGTTATGACGATGAGCTTGGGGTTCTGTGGGAATCGCCACTCGTGAGTGCTACTTTCAGCCAACACGTTAACGATCACATCACAAAGAGGGTTCATGATCACCACAATCAATAG 1086 0.4807 MRNPSLPTLATTKTKVKNNSNKSTNNNNNIGTNYSPCCNNVGLKRGPWTPEEDEVLANYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKPLNPPSIAVPSSSTTSTIPPSKPPPVIITNNNINPFHHDLTNMFNQGVHLNHLGQHHQPPPLSNPCDNHNPVPAAATDDVSAMGFMDNNNEDCNNDGININYYSDDVFSSFLNSLINDDAFEAQQQQHHVQTEIPTPSERSINPLPCDDRVDDHHLGSITTASASQGYDDELGVLWESPLVSATFSQHVNDHITKRVHDHHNQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01424 361 Pfam Myb-like DNA-binding domain 45 92 IPR001005 -
Gma14g01424 361 Pfam Myb-like DNA-binding domain 103 143 IPR001005 -
Gma14g01424 361 ProSiteProfiles Myb-like domain profile. 93 143 IPR001005 -
Gma14g01424 361 SUPERFAMILY Homeodomain-like 42 139 IPR009057 -
Gma14g01424 361 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 29 293 - -
Gma14g01424 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 92 IPR017930 -
Gma14g01424 361 CDD SANT 103 143 IPR001005 -
Gma14g01424 361 CDD SANT 47 92 IPR001005 -
Gma14g01424 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 147 IPR017930 -
Gma14g01424 361 ProSiteProfiles Myb-like domain profile. 40 92 IPR001005 -
Gma14g01424 361 SMART sant 97 145 IPR001005 -
Gma14g01424 361 SMART sant 44 94 IPR001005 -
Gma14g01424 361 Gene3D - 42 98 - -
Gma14g01424 361 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 29 293 - -
Gma14g01424 361 Gene3D - 102 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01424 Gma-Chr14 30247892 30249107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01424 23 276 MYB Transcription Factor Family AT3G13540 51.737 1.48e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma14g01424 Myb_DNA-binding 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01424 K09422 - gmx:100782308 707.597