Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01422 ATGTCGTCGACGACGCAGAATCGTCGTTCGTCCTTTACTTCCTCGACAGCGTCGTCTTTGGCAAAAGCGAAACGACTTCCATCTTCGGTGTCGTTGTGGTCGTCGTCGGGGAAGGCGAAGAGGGTTACTACTCAGAACGTGGCTGTGAAGAGAGCGCCTCTCGCCAACCTCACCAATCAGAGGAACGCGTCTTCTTCTTCTTCTTCTTCTTTGGTGCAAGGTGGTTCAATTAAAGTTTCCAAGACCAAGAAAGAGGCTCCTGCAAGAACCAGCATCACAAAATCAACAATTTCTTGGAACAAATTACCCGAGTTAAAATCTGTTAACTCAAGCTCAGTTGTTATTCCAAGGGCTAATTCTTTACCACGAAGGAAGGATGCTGCTCCCACAGTTGCCTCATTCGCCGTGCCTGTCCATAGCAGTATCGATGTTTCTCCTAGTAAAATAGATGGAAGGTCCGTTTCTATGGATGAGACAATGTCTTGTGATTCTATCGAGAGTCCTGATGAAGTTGAATATATGGATAACAGGGATGTTTCAGATGTTCATTCAATTCAGAGAGAGATAACAAGCAATTTAAACATTTCTGATACCAAAGAGCCAGAAGGTTACGTATGTAGTAGGGAAATAATTGTTGAGTTGGAAGAAAGAGTGGACAAGATTGTCAATATTGACAATATTTACTCCGATACGCAGCTTTGTGCAACCTATGTTTGTGACATCTACAAGCACCTACGTGAATCTGAGGAAAAGAAAAGGGCTTCCCCTGACTTCATGGACAGAATTCAGAAGGACATAAATGTTGGCATGCGTGCTATATTGGTTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGTCTTGTACCTGAAACATTGTATTTGACAGTGAACTACTTAGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAGGTTACAACTACTTGGTGTTTCATGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCTCCTCAGGTGGAAGAATTTTGTTATATAACCGACAATACTTACTTAAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTTAAGTTCGAAATGACAGCTCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTGCTCATGATGTCCAGGAGATCCCTTCACTTCAACTGGAGTACCTAACCAACTTTATTGCCGAATTATCTCTCTTGGAGTACAGTATGTTGAGTTATCCTCCATCACTGATAGCTGCTTCTGTAATTTTCCTTGCCAGATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCTACATTGCAGCATTACACGCTCTACCGGCCTTCTGACTTGTGTGCATGTGTAAAAGATCTCCATCGTCTTTGTTGCAGCAGCCATGATTCTAATTTACCTGCAATCAGAGATAAATACAGTCAGCATAAGTACAAATGTGTAGCCAAGAAGCACATCCCTCCTTCAATACCTCGAGAAGTTTTCCAGATCAACTGA 1515 0.4191 MSSTTQNRRSSFTSSTASSLAKAKRLPSSVSLWSSSGKAKRVTTQNVAVKRAPLANLTNQRNASSSSSSSLVQGGSIKVSKTKKEAPARTSITKSTISWNKLPELKSVNSSSVVIPRANSLPRRKDAAPTVASFAVPVHSSIDVSPSKIDGRSVSMDETMSCDSIESPDEVEYMDNRDVSDVHSIQREITSNLNISDTKEPEGYVCSREIIVELEERVDKIVNIDNIYSDTQLCATYVCDIYKHLRESEEKKRASPDFMDRIQKDINVGMRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSGNAMNRQRLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYLKEEVLQMESAVLNYLKFEMTAPTVKCFLRRFVRAAAHDVQEIPSLQLEYLTNFIAELSLLEYSMLSYPPSLIAASVIFLARFILFPSKKPWNSTLQHYTLYRPSDLCACVKDLHRLCCSSHDSNLPAIRDKYSQHKYKCVAKKHIPPSIPREVFQIN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01422 504 SMART cyclin_7 373 462 IPR013763 -
Gma14g01422 504 SMART cyclin_7 276 360 IPR013763 -
Gma14g01422 504 PANTHER CYCLINS 40 503 IPR039361 -
Gma14g01422 504 PANTHER CYCLIN-A1-1 40 503 - -
Gma14g01422 504 SMART Cyclin_C_2 369 493 IPR004367 -
Gma14g01422 504 MobiDBLite consensus disorder prediction 1 92 - -
Gma14g01422 504 CDD CYCLIN 367 461 IPR013763 -
Gma14g01422 504 Pfam Cyclin, C-terminal domain 369 489 IPR004367 -
Gma14g01422 504 PIRSF Cyclin_A_B_D_E 6 500 IPR039361 -
Gma14g01422 504 MobiDBLite consensus disorder prediction 1 77 - -
Gma14g01422 504 SUPERFAMILY Cyclin-like 229 366 IPR036915 -
Gma14g01422 504 SUPERFAMILY Cyclin-like 369 495 IPR036915 -
Gma14g01422 504 Gene3D - 240 489 - -
Gma14g01422 504 Gene3D - 254 367 - -
Gma14g01422 504 CDD CYCLIN 270 359 IPR013763 -
Gma14g01422 504 ProSitePatterns Cyclins signature. 271 302 IPR006671 -
Gma14g01422 504 Pfam Cyclin, N-terminal domain 240 366 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01422 Gma-Chr14 30219832 30224210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01422 1 501 Core Cell Cycle Gene Families AT1G44110 57.031 1.29e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01422 K06627 - gmx:100798216 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01422 14 30219832 30224210 Gma04g02355 04 53970922 53973621 PCT
Gma14g01422 14 30219832 30224210 Gma06g01039 06 9731596 9734548 PCT
Gma04g02355 04 53970922 53973621 Gma14g01422 14 30219832 30224210 PCT
Gma06g01039 06 9731596 9734548 Gma14g01422 14 30219832 30224210 PCT