Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01376 ATGTCTCCATTTCGCATGTTGAGTTTTTACATTGAGTTCGCTGGTCGTAAAGGTCATTTTCCTGAGCCTACCCATGATCCTGTAATCCAAGATTTAATTCATGAAGTGGACCCAGATATTATTATTGGATACAACATCTGCAAATTTCACTTGCCATATGTTATTAAGAGAGTTGCGAACCTGAAGATAGCAGAATTTCCAATTTTGGGTCGTATTAGGAACAGTAGAGTTCGAGTGAAGGATACAACTTTCTCATCAAGGTAA 264 0.3788 MSPFRMLSFYIEFAGRKGHFPEPTHDPVIQDLIHEVDPDIIIGYNICKFHLPYVIKRVANLKIAEFPILGRIRNSRVRVKDTTFSSR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01376 87 Pfam DNA polymerase family B, exonuclease domain 32 85 IPR006133 -
Gma14g01376 87 Gene3D - 29 87 IPR036397 GO:0003676
Gma14g01376 87 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 30 87 - -
Gma14g01376 87 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 1 30 - -
Gma14g01376 87 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 30 87 - -
Gma14g01376 87 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 1 30 - -
Gma14g01376 87 SUPERFAMILY Ribonuclease H-like 2 83 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01376 Gma-Chr14 28981443 28982362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01376 31 87 Core DNA Replication Machinery Family AT5G63960 75.439 1.94e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01376 K02327 - gmx:100817379 136.346