Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01374 GATGAAGATTCAACACAAGGCCCTCATGCTTTTGTATCTAAAGATGAACTGTGCGGACAATTCTTTGCTGCTCTGGAGAAAAATCACTATTTTTGGAGCAATACTGATGGGAGTGATGATCCTGGGCAACTGGAGAAAGCTAGTTGTTTATTCGATGAGGCTTGTATGGAAATGGAAAGATGTGATTGTCACCAATTTAGTTTGAAGAATTTGGCTGAATCACTAAAAACACTAGGTAACAAGGCAATGCAATCTAAGAAATACTCTGATGCAATTGAGTTGTATAATTGTGCCATTGCAGTCCATGAAAAGAGTGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGATTAACAAATATACAGAAGCAATCCAAGATTGTCTTAGATCCATTGAGATTGATCCAAACTATACCAAGGCATACAGTCGTCTGGGTTTGGTTTATTATGCACAAGGAAATTACAGAGATGCTATTCATAAAGGCTTTAGAAAAGCCTTGCAGTTGGATCCCAATAATGAGTCTGTCAAAGAAAATATACGGGTGGCTGAGCGTAAATTACTAGAAGAGCAACACCGTGCATATCCCAACCAGCTAAACATTTTTTTCCTCTTTCATTCTCTAAAGAATACAAGATCATCTCAAGAATTCCCAAACCAATCTGCACAAGGAGGATCAAGAAGCCATGGCGAGCCACCTCCATTTTCCTCTATGCCGTTTAACCCCCGTGATATTGCAAGCATGTTCATGAACTTCACGAACGCTACAAATGCACAGCAGCAGGGGTCACATTCTCAGGAAAGGCAAGAAGATAGCAATGGTAGTGGAGCTAGTGAGCCTGAAATAAGAATTGGGGGAAATATTAGTGTAAACATGGAGGACATGCCAGAGGATATAACAGGGGCCTTTCAATCTATGATGGAAATGTTATCTGGGGCTGCACCCCCCGGGCAACCGCAAGATCAAATGAATGGAAGAGCAGCACCAAACTAA 996 0.4147 DEDSTQGPHAFVSKDELCGQFFAALEKNHYFWSNTDGSDDPGQLEKASCLFDEACMEMERCDCHQFSLKNLAESLKTLGNKAMQSKKYSDAIELYNCAIAVHEKSAVYYCNRAAAYTQINKYTEAIQDCLRSIEIDPNYTKAYSRLGLVYYAQGNYRDAIHKGFRKALQLDPNNESVKENIRVAERKLLEEQHRAYPNQLNIFFLFHSLKNTRSSQEFPNQSAQGGSRSHGEPPPFSSMPFNPRDIASMFMNFTNATNAQQQGSHSQERQEDSNGSGASEPEIRIGGNISVNMEDMPEDITGAFQSMMEMLSGAAPPGQPQDQMNGRAAPN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01374 331 Pfam TPR repeat 115 154 - -
Gma14g01374 331 ProSiteProfiles TPR repeat profile. 140 174 IPR019734 GO:0005515
Gma14g01374 331 Coils Coil 174 194 - -
Gma14g01374 331 ProSiteProfiles TPR repeat profile. 72 105 IPR019734 GO:0005515
Gma14g01374 331 MobiDBLite consensus disorder prediction 258 277 - -
Gma14g01374 331 ProSiteProfiles TPR repeat profile. 106 139 IPR019734 GO:0005515
Gma14g01374 331 MobiDBLite consensus disorder prediction 258 284 - -
Gma14g01374 331 MobiDBLite consensus disorder prediction 215 244 - -
Gma14g01374 331 PANTHER LD24721P 20 328 - -
Gma14g01374 331 SMART tpr_5 140 174 IPR019734 GO:0005515
Gma14g01374 331 SMART tpr_5 72 105 IPR019734 GO:0005515
Gma14g01374 331 SMART tpr_5 106 139 IPR019734 GO:0005515
Gma14g01374 331 MobiDBLite consensus disorder prediction 310 331 - -
Gma14g01374 331 Gene3D Tetratricopeptide repeat domain 67 239 IPR011990 GO:0005515
Gma14g01374 331 PANTHER LD24721P 20 328 - -
Gma14g01374 331 SUPERFAMILY TPR-like 71 185 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01374 Gma-Chr14 28892778 28907072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01374 71 170 U-box Gene Family AT3G07370 30.000 1.22e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01374 K16365 - gmx:100775346 681.404