Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01352 ATGCCAGTGAACCGTGGCCAAGGCCAAACCACAAGGTGGTATCAGCTATGCTTTATTCCCACTAGTTCAGACAATTCAGATGATTCAGACATAGAATCTGTAGTCCTAACTCCTAGTAACCTAACTCAAACTAGTAGTACATGGCAAGAACTTTCTCCGCCGATACCACCAGAATCAGAACCTGAAATTGATTGGAGTTTaccaccaccaccaccaccaccaccaccaccgtcaccgccaccgccacTGCCAAATTTTCTACCACTTCAGAGAGTTGTACTAACTCTTGGTACTCCAACTAGTAGTACATGGCAAGAACTTTTTCCACCGTCATCACCATTGTCGTCACCACCACGTCCAACTCGAATTAGTAGTACATGGCAAGAACTTTCTCCGCCATCTTCACCATTGTCATCACGACCACCAACAAACCTAGAACCTGAAATTGATATGAGTTTGTCATTGTTATCACCACCACCACTGTTACCAGATTTTCTACAGTCTCGGCCTCTTCAGAGAGCTTCGGCTAGAACATTTAATATTGAAGTACAACAAGATAGACACCAACCTCCAAGTCCAAGTCATGTGTTTGAAGGTGATCAAAGTGACTGCTCAATGAATGTCAAGAATGGCATTACAAGGGTGAGAGTCTCAGAGATAGATAAACTCTTTCATTGCCCCATTTGCATGGATGAGTTTAAAGTGGGTGGTGACAAAGCATGCCAGCTACCCTGCACCCACACCTACTGTTCTGAATGCATTCTTCGTTGGCTTGACAACAATAAAACATGTCCAGTTTGCAGGCTTCAGTTGAATGGTTGTAGTTTTGATAGCATAAATTGCAATAATGGTTTGGACTCACAACCTCAAATTCCGTCCCTGCCATCACGGTCACCAATAGTTCATAATGATTCGCCCCAGCGTTGGGAGAACTTTTCCCAATCCCCTCCCTACCTTTTACAAGGTATAGAGAATAGCATCAATGATAATAATGGTTTGGACTCACAACCTGAAATTCTACTGCCGCCGCCGCCACCACCACCATCAGCTCATAATGACTTGCACCGGCCCTGGGAGTACTACTTTGAATCTCCCTACCTTATAGTACAAGATATAGAGAATAGTGAAGGTGGTAACTCAGATGAAGCTGATTATGATAGTGCATGTGATGAGCTTGGCGATCCTCATGAAGATGGAGCTTCTCAGAGTGTTCCTGCTCCACTAACTTAA 1230 0.4179 MPVNRGQGQTTRWYQLCFIPTSSDNSDDSDIESVVLTPSNLTQTSSTWQELSPPIPPESEPEIDWSLPPPPPPPPPPSPPPPLPNFLPLQRVVLTLGTPTSSTWQELFPPSSPLSSPPRPTRISSTWQELSPPSSPLSSRPPTNLEPEIDMSLSLLSPPPLLPDFLQSRPLQRASARTFNIEVQQDRHQPPSPSHVFEGDQSDCSMNVKNGITRVRVSEIDKLFHCPICMDEFKVGGDKACQLPCTHTYCSECILRWLDNNKTCPVCRLQLNGCSFDSINCNNGLDSQPQIPSLPSRSPIVHNDSPQRWENFSQSPPYLLQGIENSINDNNGLDSQPEILLPPPPPPPSAHNDLHRPWEYYFESPYLIVQDIENSEGGNSDEADYDSACDELGDPHEDGASQSVPAPLT 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01352 409 MobiDBLite consensus disorder prediction 338 352 - -
Gma14g01352 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 296 IPR013083 -
Gma14g01352 409 MobiDBLite consensus disorder prediction 20 53 - -
Gma14g01352 409 ProSitePatterns Zinc finger RING-type signature. 245 254 IPR017907 -
Gma14g01352 409 Pfam Ring finger domain 225 268 IPR001841 -
Gma14g01352 409 MobiDBLite consensus disorder prediction 54 87 - -
Gma14g01352 409 MobiDBLite consensus disorder prediction 118 134 - -
Gma14g01352 409 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 107 268 - -
Gma14g01352 409 PANTHER GB|AAD18119.1-RELATED 107 268 - -
Gma14g01352 409 SMART ring_2 226 267 IPR001841 -
Gma14g01352 409 MobiDBLite consensus disorder prediction 103 147 - -
Gma14g01352 409 SUPERFAMILY RING/U-box 225 271 - -
Gma14g01352 409 MobiDBLite consensus disorder prediction 371 409 - -
Gma14g01352 409 MobiDBLite consensus disorder prediction 20 87 - -
Gma14g01352 409 MobiDBLite consensus disorder prediction 324 355 - -
Gma14g01352 409 ProSiteProfiles Zinc finger RING-type profile. 226 268 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01352 Gma-Chr14 28045610 28046839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01352 226 277 C3H Transcription Factor Family AT5G41440 42.308 3.09e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01352 K11982 - gmx:102665811 768.844