Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01250 ATGAAGTGTGAAGTTACCGTAATGGTGCAATCCCCAACCTCAACCTTCCGCGCCTTCTCCGATGCCGAGGAGGATGAAGAAGACAATGAAGAAGACCAAGACCAAGACCAAGACAACGTTTCTGCCGACGAATACGACGATGTTTTGGGTGAGGCTTCCGACGAGGCCGACGTGTTCGCTCGGCACGATGGATTCAATTGGCAGAGAGTCGACAAGCTATGCAACGAAGTCAGGGAGTTCGGCGCCGATCTCATCGACGTCGACGAGCTCACCTCCGTCTACGACTTCCGCAACAACATGTTTCAGCAGCAGGCGATACTGGCTTTTCTGAGAGGCTTCTCGATGGTGGTTTCCGCTTCGACGAGTAGTGGGAAGACGCTGATTGCAGAGGCTGCGGCGGTGGCCACGGTGACTAGGGGACGAAGAATATTCTACACGACATCGTTCAAGGCGCTGTCCAATCAGAAATTTGGCGAGTTCCGCGAGACTTTTGGCGACAGTAATGTTGGCCTTCTCACGGGCGATTCTGCAGTGAACAAGGATGCTCAGGTTTTGATTATGACCACGGAGATATTGCACAAAATAGTGGTGGAGGACTGGCTGATTAATTTTGGTAACCAATTACTCACATTGTTCAAAGAAGCCACGCTGCAAAGGAGGAACAGCCATGTCTTTGTTGCTTATACTTCTGCTGTTGCTACCACTCTACTCTTTCCTATCAATTTTTTTAGTAGAAGATCAAGAGTGGTTCCTCCACTTAGTTTCTCCATAGCATCCAAAATCATTCTCATTGGGATGATTGGAACCTCATGTCAGATAATGTATTATGTTGGAGTTAGCTACAGTTCTACAACACTTGCTTCATCAATCGCCAATCTGGAACCTGCTTTCACCTTCATTCTTGCCATCATTTTCAGAAACCGCTCGGTCGACACCCACATTGCCCCACATTCATTTCGATACTATCAAAAACCGCTGGCTAGAACCCACAGAACCTCCTATCGAAGAAAAGTCGAAGAAAACCCTACACTGCTGTTGGAACTGTGTGGGTCGAAAAAACCCTACACTGCTCTTGGAATAGTCGAGGGTGCTCAAAGCTCAAAGCTTTCTACGCTTCCAGTTAACAAGCTTGACGAGAGTTACACACCGAGCAAAGTTTCCATCCGTGACGATGATGGTTTTCACAACTTGAAGGAGATTAAGACCGTGGAACTCGTGAAGGCAACTGGGTGGGTTTATCTATCCTTGTCTGGAGCTGATCCTAGGTAA 1269 0.4783 MKCEVTVMVQSPTSTFRAFSDAEEDEEDNEEDQDQDQDNVSADEYDDVLGEASDEADVFARHDGFNWQRVDKLCNEVREFGADLIDVDELTSVYDFRNNMFQQQAILAFLRGFSMVVSASTSSGKTLIAEAAAVATVTRGRRIFYTTSFKALSNQKFGEFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILHKIVVEDWLINFGNQLLTLFKEATLQRRNSHVFVAYTSAVATTLLFPINFFSRRSRVVPPLSFSIASKIILIGMIGTSCQIMYYVGVSYSSTTLASSIANLEPAFTFILAIIFRNRSVDTHIAPHSFRYYQKPLARTHRTSYRRKVEENPTLLLELCGSKKPYTALGIVEGAQSSKLSTLPVNKLDESYTPSKVSIRDDDGFHNLKEIKTVELVKATGWVYLSLSGADPR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01250 422 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 17 193 - -
Gma14g01250 422 Pfam DEAD/DEAH box helicase 101 206 IPR011545 GO:0003676|GO:0005524
Gma14g01250 422 Pfam Anaphase-promoting complex, subunit 10 (APC10) 376 418 IPR004939 -
Gma14g01250 422 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 106 251 IPR014001 -
Gma14g01250 422 Gene3D - 59 231 IPR027417 -
Gma14g01250 422 SMART ultradead3 93 256 IPR014001 -
Gma14g01250 422 Pfam EamA-like transporter family 212 310 IPR000620 GO:0016020|GO:0016021
Gma14g01250 422 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 17 193 - -
Gma14g01250 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 311 - -
Gma14g01250 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 201 IPR027417 -
Gma14g01250 422 ProSiteProfiles DOC domain profile. 284 422 IPR004939 -
Gma14g01250 422 SUPERFAMILY Galactose-binding domain-like 375 418 IPR008979 -
Gma14g01250 422 Gene3D - 358 422 - -
Gma14g01250 422 MobiDBLite consensus disorder prediction 21 42 - -
Gma14g01250 422 MobiDBLite consensus disorder prediction 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01250 Gma-Chr14 20949028 20954489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01250 210 311 Nodulin-like Gene Family AT3G28050 54.902 1.18e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01250 K26077 - gmx:100780908 283.108