Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01210 ATGCTCTATAGCTGCGGTCTCTGTGGAAAGGATTATAAAAGTTCTAAAGCTCATGCTGAGCACCTTAAATCACGTGGTCATATGATGCGGGCCTCTGAAGAAACTAGCCATGCAGATGAGAAGGCAATAATTAAGCCACTTCCACAACGTGTTGTGAATAGGCCTCCTCCTAGAAGAGAGGTAGATAACTCTGAAAATGAAGAATGTGAAGATGAATGGGAGGAGGTTGATCCTGAAGAGGATTTGGTTGATGAAGCACGTGCTGCCAAGTCCTTGACTGATTTGAATGTGAATGAGCATGGTGAAAATGTTGATATGGAGGAAGATGCTGATGATTTTGAGGAGATCCAAAAGGTCAAAAGAGACTACATGTGTCTGTACTGCAATGATCGATGTTATCCTTTTCGTAGCTTGGAAGCAGTCAGGAAACCTATGGAAGCAAAAAGTCACTGTAAAGTGCATTATGAAACCTCTGTCATCACCAGCAAATATGGCTGTCAATGCTGCGTTGGCTTCAAGGAGCATGGGCTTGACCACTATCCAATCAAGGGAGAAGATAATTGTGAGGATGAAAAGTGCCGAAGGAAATGA 591 0.4298 MLYSCGLCGKDYKSSKAHAEHLKSRGHMMRASEETSHADEKAIIKPLPQRVVNRPPPRREVDNSENEECEDEWEEVDPEEDLVDEARAAKSLTDLNVNEHGENVDMEEDADDFEEIQKVKRDYMCLYCNDRCYPFRSLEAVRKPMEAKSHCKVHYETSVITSKYGCQCCVGFKEHGLDHYPIKGEDNCEDEKCRRK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01210 196 Pfam C2H2 type zinc-finger (2 copies) 117 158 IPR041661 -
Gma14g01210 196 PANTHER ZINC FINGER PROTEIN 622 117 156 IPR040025 -
Gma14g01210 196 PANTHER ZINC FINGER PROTEIN 622 1 113 IPR040025 -
Gma14g01210 196 ProSitePatterns Zinc finger C2H2 type domain signature. 5 27 IPR013087 -
Gma14g01210 196 PANTHER CYTOPLASMIC 60S SUBUNIT BIOGENESIS FACTOR REI1 HOMOLOG 1-LIKE 1 113 - -
Gma14g01210 196 PANTHER CYTOPLASMIC 60S SUBUNIT BIOGENESIS FACTOR REI1 HOMOLOG 1-LIKE 117 156 - -
Gma14g01210 196 MobiDBLite consensus disorder prediction 19 44 - -
Gma14g01210 196 MobiDBLite consensus disorder prediction 65 79 - -
Gma14g01210 196 MobiDBLite consensus disorder prediction 19 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01210 Gma-Chr14 19535259 19536283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01210 1 155 C2H2 Transcription Factor Family AT4G31420 39.024 4.40e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g01210 zf-C2H2_2 8.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01210 K14816 - gmx:100796317 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01210 14 19535259 19536283 Gma14g01210 14 19535259 19536283 ECH
Gma17g01892 17 32968883 32971313 Gma14g01210 14 19535259 19536283 GST