Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01204 ATGACCAACACTTCCAATTCTCTTTCTTTCTCCCTCTCTAGGGTTTCAAAGATGTTTTCGGGATCCCAATTCGACGTCACCACCGCCTTCTCCGGCGGCGGTTTCACGTCCTCCCAGCCGTCTACCCTCAACGATTCTTCTCCCGCGCCGTCAAACAGCCGCGAAACTCCGGGTTTGGTGCCGGTGACAGTGAAGCAGATAAGCGAGGCCTCTCAATCCGGTGATGAAAAGTCGAATTTCGTGATCAACGGTGTAGATCTGAACAATGTAACACTGGTTGGGATGATGTTTGAGAAAGTTGAGAGAAATACTGATGTCAGTTTTGTTTTGGATGATGGAACAGGACGAATCAAATGTCGAAGATGGATTAATGAGGCTTTTGACACAAAGGAAATGGAGGCAGTGATGAATGATATGTACGTTCGTGTTTATGGGCATTTGAAAAGCTTTCAAGGTGTTAAGCAACTTGTTGCCTTCTCTGTCAGGCCTGTGACAAATTTTGATGAGATCCCTTTTCACTTTATTGATTGCATCCATAACCATCTTCGCTCCAAAATAAAGGTGGAAGGAATCACTTCTGCAAATCCTTCATCTGGCTCATCTTTGGAAACTCCTGTCAAAAGTGCACCAAATAGATCTCAGGCATCAAATCCAGTATGTGCACAACATAGCGTGGATGGACTTAAGGGTATTGATAAATTGGTTATGGACTACCTGGAGCAGCATTCAGATAGGTCAGATGGACGTGGAATACATGTTGATGAACTATCACGGGAGCTCAAGCTTCCAATTGAAAAGATCAAGTTGTCGCTGAAGACTCTTGCAGATGATGGTGAAATATACTCCACCATAGATGACGACCATTACAAAAAAGCCTGA 879 0.4425 MTNTSNSLSFSLSRVSKMFSGSQFDVTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGITSANPSSGSSLETPVKSAPNRSQASNPVCAQHSVDGLKGIDKLVMDYLEQHSDRSDGRGIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYKKA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01204 292 CDD RPA2_DBD_D 89 182 - -
Gma14g01204 292 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 18 292 - -
Gma14g01204 292 MobiDBLite consensus disorder prediction 35 58 - -
Gma14g01204 292 SUPERFAMILY Nucleic acid-binding proteins 59 183 IPR012340 -
Gma14g01204 292 Pfam Replication protein A C terminal 197 287 IPR014892 -
Gma14g01204 292 Pfam OB-fold nucleic acid binding domain 90 162 IPR004365 GO:0003676
Gma14g01204 292 PANTHER REPLICATION PROTEIN A-RELATED 18 292 IPR040260 -
Gma14g01204 292 Gene3D - 222 292 IPR036388 -
Gma14g01204 292 SUPERFAMILY "Winged helix" DNA-binding domain 226 290 IPR036390 -
Gma14g01204 292 MobiDBLite consensus disorder prediction 193 218 - -
Gma14g01204 292 PIRSF RPA32 18 292 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma14g01204 292 Gene3D - 56 185 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01204 Gma-Chr14 19411156 19415103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01204 18 290 Core DNA Replication Machinery Family AT2G24490 47.163 2.30e-87 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01204 K10739 - gmx:100789756 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01204 14 19411156 19415103 Gma14g01204 14 19411156 19415103 ECH