Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01151 ATGCGCTTCTCCATCTCATTCCTCGTTGTCGTTTTCGTCGCGCTTTGCGATTCTTCGAGTCAACGCTCCCGTTTCGCTTCTCTTAATTGTCGTTTTTCACTTGCGGAAATTAGGTTAGGTTCGAGCGGCACTTTGCCATTGTTGATGGAGCGGTCCGGGAGCTTAAACAGCAGTCAGCATGTTATAGAAATAGCTGGGAGCGCCGATGCTTCCACATCGTCTGCATCACATCATGATAGACATTTTAATGGCACAAATGTGACGCAGCATGAAGAAAGAATTAGCGGTGCAAGGATGCCTCTTTCTCAGCCTTCAGTTTCAGCAACTAGTGTATCTAATGGGTCAAATAGTCGAAACTCATCGTTCATAAGACGAGGGGATACTCGGCGGAATAGGAGTCCTGTGCATTCAGGGTTATGGATATCTATTGAGCTGGTCCTACTCCTGAGCCAGATTGTTGCATCTATAATTGTTTTGTCTTTGTCAAGGCATGAACATCCGCGTACCCCGTTGTTTCAATGGATCATTGGTTATGCTTCTGGATGTGCTGCTACCCTCCCTCTACTTTATTGGCGGTATTATCATCATAACCATATGCAAGAGCAAGAGTCATCTCAATCTAGGCAGACTTCTCCTCGGATTAATGATCCTTCAGGGACACTTCTTTTCAGTTCTAGAACTAATGGTGGAGAAGATGGTCAGTCTGCCGTTGCATCTTCCAGAAGCAATCAACCTTCATTATTGATGAATAGAAGAATGAAGACACTAGTGGAGTACTTCAAAATATCTTTAGATTGCTTTTTTGCTGTATGGTTTGTTGTTGGAAATGTATGGATCTTTGGGGGACATTCATCTGCCAATGAAGCTCCTAATTTGTACAGGTTATGTATAGTGTTTCTTGCATTTAGCTGCATTGGTTATGCTATGCCCTTCATTTTCTGTTCAACAATCTGCTGTTGTCTCCCTTGTATAATTTCTATCCTTGGGGTTAGAGAGGATATGTCACAAAACAGAGGGGCAACTTCTGAATCTATTAATGCTTTGCCGATTTACAAGTTCAAGATGAAGAAAAATAAAAGAAATGGCAATGGCAACTCAGCTGCTGCCGAAGGTGGAGTTGTGGCTGCAGGAACTGAAAAAGAGCATGTGATATCTGGAGAAGATGCGGTTTGCTGCATCTGCCTGGCAAAGTATGAGAATAATGATGAGCTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGACTGCGTCGATAAATGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAGTGATGTTGGTGAGAACTTAACAGGATCGGTCTCTGGAGAAGATGCCAGCCAACAACAGGGTGAGAGCAGGGTTGAGAATGGCCTCACGAATACCTCAGTCTAG 1401 0.434 MRFSISFLVVVFVALCDSSSQRSRFASLNCRFSLAEIRLGSSGTLPLLMERSGSLNSSQHVIEIAGSADASTSSASHHDRHFNGTNVTQHEERISGARMPLSQPSVSATSVSNGSNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLLSQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQEQESSQSRQTSPRINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGHSSANEAPNLYRLCIVFLAFSCIGYAMPFIFCSTICCCLPCIISILGVREDMSQNRGATSESINALPIYKFKMKKNKRNGNGNSAAAEGGVVAAGTEKEHVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSDVGENLTGSVSGEDASQQQGESRVENGLTNTSV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01151 466 ProSiteProfiles Zinc finger RING-type profile. 391 432 IPR001841 -
Gma14g01151 466 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 49 458 - -
Gma14g01151 466 CDD RING-H2_RNF111_like 390 434 - -
Gma14g01151 466 Pfam Ring finger domain 391 432 IPR001841 -
Gma14g01151 466 MobiDBLite consensus disorder prediction 442 466 - -
Gma14g01151 466 SMART ring_2 391 431 IPR001841 -
Gma14g01151 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 440 IPR013083 -
Gma14g01151 466 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 49 458 - -
Gma14g01151 466 SUPERFAMILY RING/U-box 383 438 - -
Gma14g01151 466 MobiDBLite consensus disorder prediction 101 122 - -
Gma14g01151 466 MobiDBLite consensus disorder prediction 101 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01151 Gma-Chr14 18006243 18026766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01151 46 442 C3H Transcription Factor Family AT1G80400 50.500 4.80e-139 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01151 - - gmx:100778728 787.719