Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01148 ATGGATAGAGAAAATGCTGTAATGGGTGGTGTAAGAGAGGGTGAAGAGCGTGGTGTTCGGGTCACTCGAGCAATGGCAAGAGCTGCTTTGGGTTGGGTCTCTGCCTCTTCTAGACCGTCTTTCAAGAAGGAATGTAAAAACAACAGTAGGACAGCACTAGCAGATGTATCTAACATAAGCAGAAAATCACAGGTATGCAGTGCAAGAGGAGGTTACAAGAAGACTAACACAAAGGGATCTTCCAATGTCTCCATTCAAGTTTTGTCAACTCAAGAAGATGTTAGAGCAGAGTTAGCAAAAGATTTATCCACAATATCGATGGTACAGACACATGATGCTATTGTAGAAAGGCCGGAAGACACAGAGCTAGTGCAACCCTCTATGTCTGTTATGGCAGGTCCTCTGCTTTCAATGCAGAACTCTATGAAGTCTGATGAAATCCTTAGCCCTCCAAACAAAGACATTGATATGATTACTGAGAAACTAAAACTTTCAGAACGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATATTTGTCAGGGAGTTTGAAAGGAGACCGTTAAGTGATTACATGGACAAGTTACAGCAAGATATCACTCCAAGCATGCGAGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGGTTCAGAAACAAAGGCTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAAGCAGAGGTATTGAAAATGGAGAGTGGGGTTCTAAATCTGTTGCATTTTCAGTTATCTGTTCCCACCACAaaaacatttctcagGAGGTTCATCCTAGCAGCACAATCTTCTTACAAGGTTTCTTATGTTGAACTGGAATTTCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCCTTATAGCTGCATCTGCGGTATTAATCGCCAGATGGACTCTCAACCAATCAGAACATCCATGGAATTCAACCATGGAACACTATACAAATTACAAAGTGTCTGAGCTTAAAACTACTGTCCTTGCACTGGCAGATTTGCAACTTGATACGAAAGGCTGTTCCCTGAATGCTATTCGCGAAAAATATAAACAGCAGAAGTTCAAGAGTGTGGCAAATTTGTCTCCGAAACCGGTGCAGTCACTTTTCGAGGCTCAAGTTAAAACTGTAAATGATGCATATGTGAAGACTAAATATTGA 1395 0.4036 MDRENAVMGGVREGEERGVRVTRAMARAALGWVSASSRPSFKKECKNNSRTALADVSNISRKSQVCSARGGYKKTNTKGSSNVSIQVLSTQEDVRAELAKDLSTISMVQTHDAIVERPEDTELVQPSMSVMAGPLLSMQNSMKSDEILSPPNKDIDMITEKLKLSERLGIVDIDSVELKDPQVWSSYAPDIYNNIFVREFERRPLSDYMDKLQQDITPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLVQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESGVLNLLHFQLSVPTTKTFLRRFILAAQSSYKVSYVELEFLANYLAELTLVEYSFLQFLPSLIAASAVLIARWTLNQSEHPWNSTMEHYTNYKVSELKTTVLALADLQLDTKGCSLNAIREKYKQQKFKSVANLSPKPVQSLFEAQVKTVNDAYVKTKY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01148 464 CDD CYCLIN 317 409 IPR013763 -
Gma14g01148 464 SMART cyclin_7 226 310 IPR013763 -
Gma14g01148 464 SMART cyclin_7 323 411 IPR013763 -
Gma14g01148 464 Gene3D - 204 317 - -
Gma14g01148 464 SUPERFAMILY Cyclin-like 318 441 IPR036915 -
Gma14g01148 464 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Gma14g01148 464 Pfam Cyclin, N-terminal domain 190 317 IPR006671 -
Gma14g01148 464 SMART Cyclin_C_2 319 442 IPR004367 -
Gma14g01148 464 Pfam Cyclin, C-terminal domain 319 441 IPR004367 -
Gma14g01148 464 Gene3D - 190 438 - -
Gma14g01148 464 PANTHER CYCLINS 34 448 IPR039361 -
Gma14g01148 464 SUPERFAMILY Cyclin-like 179 316 IPR036915 -
Gma14g01148 464 CDD CYCLIN 220 305 IPR013763 -
Gma14g01148 464 PIRSF Cyclin_A_B_D_E 10 454 IPR039361 -
Gma14g01148 464 PANTHER CYCLIN-A2-4 34 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01148 Gma-Chr14 17874124 17879979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01148 16 448 Core Cell Cycle Gene Families AT5G25380 52.088 1.56e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01148 K06627 - gmx:100777132 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01942 17 34494048 34501005 Gma14g01148 14 17874124 17879979 GST
Gma14g01148 14 17874124 17879979 Gma04g00655 04 6052030 6062268 PCT
Gma14g01148 14 17874124 17879979 Gma06g00648 06 5873339 5878539 PCT
Gma04g00655 04 6052030 6062268 Gma14g01148 14 17874124 17879979 PCT
Gma06g00648 06 5873339 5878539 Gma14g01148 14 17874124 17879979 PCT