Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01138 ATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTAGATGTTTATATCCATGATTACTTAGTGAAGAGGGATTTGAAAGCTTCAGCTCAGGCTTTTCAAGCTGAAGGGAAAGTGTCCTCGGACCCTGTTGCTATTGATGCCCCTGGAGGATTTCTGTTTGAGTGGTGGTCTGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAGCACTCAGAGGTTGCTGCATCTTATATCGAGACCCAGTTAATTAAGGCGAGAGagcaacaacagcagcagcagcagccacaacctcagcagtcgcaacatcaacaacagcagcagcagcaacaacagcaacaacaacagcaacacatgcagatgcaacaaatccttttacagagggctcagcagcaacaacagcagcagcagcagcagcagcagcagcaaccacaacagcagcagctgcagcaaccacagctgcaacatcagcagcagccaccacagcaacaacagGGTAGGGATAGGGCTCATCTCTTAAATGGTGGTACGAATGGGTTAGTTGGAAACCCTGGCACGGCAAATGCACTAGCAACAAAGATGTATGAGGAAAGGTTAAAATTGCCCCTTCAAAGGGACTCTTTGGAAGATGCAGCAATGAAGCAAAGATATGGAGACCAACTCTTAGACCCAAATCATGCCTCAATATTGAAGTCATCTGCAGCTACTGGCCAGCCTTCAGGGCAAGTTTTGCATGGTGCTGCTGGTGCAATGTCTTCACAAGTTCAAGCTCGTAGTCAGCAATTACCAGGATCTACTCCTGATATAAAGAGTGAGATCAATCCTGTTTTAAATCCCAGAGCTGCAGCTCCTGAAGGATCATTGATAGCAATGCCTGGTTCGAATCAAGGTAGCAATAATTTGACTCTGAAAGGGTGGCCGCTCACAGGCTTGGAGCAACTACGTTCTGGTCTACTCCAGCAACAAAAACCTCCTTTCATACAGTCTCCTCAGCCATTTCATCAACTTCCAATGTTGACACCACAGCATCAGCAACAACTAATGCTAGCACAACAAAATTTGGCATCTCCATCTGCAAGTGATGATAATAGAAGACTCAGAATGCTGCTGAATAATAGGAATATCGGTGTAACTAAGGATGGTCTTTCAAACCCTGTTGGTGATATAGTATCAAATCTTGGATCACCTCTTCAAGCAGGTGGCCCTGCTTTTCCACGTAGTGATACAGATATGCTAATGAAGTTGAAACTGGCGCAATTACAACATCAACAGCAGAATGCCAATCCACAACAGCAGCAACTGCAACAGCATACTCTTTCGAATCAGCAATCTCAGACTTCAAATCATAGCATGCATCAACAAGATAAAATGGGGGGAGGTGGTGGCAGTGTCAATGTGGATGGTAGCATGTCAAACTCCTTTAGAGGCAATGATCAGGTTTCCAAAAACCAGACTGGGAGAAAGAGAAAGCAGCCTGCATCTTCTGGTCCTGCCAATAGTTCTGGAACAGCTAATACAGCTGGTCCATCTCCAAGTTCAGCACCCTCAACTCCCTCAACACATACACCTGGTGATGTGATGTCAATGCCTGCTTTACCTCACAGTGGTAGTTCTTCAAAGCCATTAATGATGTTTAGTGCTGATGGCTCTGGAACTCTGACATCACCTTCAAACCAATTGGCTGATGTGGACCGTTTTGTGGAGGATGGATCTCTTGATGATAATGTGGAGTCTTTTTTATCCCATGATGATACAGACCCTAGAGATACTGTTGGTCGTTGTATGGATGTAAGCAAAGGTTTCACATTTTCTGAAATAAATTCTGTACGTGCAAGCACTAACAAAGTTGTCTGTTGCCATTTCTCATCTGATGGGAAATTGCTTGCTAGCGGTGGCCATGACAAAAAGGCTGTTTTATGGTTCACAGATTCTCTAAAACAGAAAGCCACTCTTGAAGAGCATGCATATTTAATCACTGATGTCCGTTTCAGTCCAAGCATGCCTCGTCTTGCAACATCTTCATATGACAAAACTGTCAGGGTGTGGGATGTTGAAAATCCTGGATATTCGCTTCGTACCTTCACGGGACATTCTTCATCTGTTATGTCACTAGATTTTCACCCTAATAAAGATGATCTTATCTGCTCTTGTGATGTTGATGGTGAGATAAGATATTGGAGCATTAACAATGGCAGTTGTGCTAGAGTCTCAAAGGGTGGCACAGCTCAAATGAGATTTCAACCTCGTCTAGGGAGGTACCTAGCTGCAGCTGCAGAGAATGTTGTTTCTATACTTGATGTGGAAACTCAAGCATGTCGATATTCATTAAAAGGACATACAAAATCGATACATTCTGTGTGTTGGGATCCTTCTGGGGAGTTTCTGGCATCTGTAAGTGAGGACTCTGTCAGGGTTTGGACTCTTGGATCAGGGAGTGAAGGGGAGTGCGTTCATGAGCTTAGCTGTAATGGCAATAAGTTTCACTCGTGTGTTTTCCATCCAACATATTCTTCGCTGTTGGTCGTTGGTTGTTACCAGGCAAGTCTACATCCTTTCCTTATTTTGTTTCCTTTTGAGTATTCATTGGAGCTCTGGAACATGACTGAGAACAAGACGATGACTCTATCTGCTCATGAAGGTCTTATTGCGGCATTGGCGGTTTCTACTGTAAATGGTTTGGTTGCTTCAGCCAGTCATGACAAGTTTGTCAAGCTCTGGAAGTGA 2724 0.3976 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQPQPQQSQHQQQQQQQQQQQQQQHMQMQQILLQRAQQQQQQQQQQQQQQPQQQQLQQPQLQHQQQPPQQQQGRDRAHLLNGGTNGLVGNPGTANALATKMYEERLKLPLQRDSLEDAAMKQRYGDQLLDPNHASILKSSAATGQPSGQVLHGAAGAMSSQVQARSQQLPGSTPDIKSEINPVLNPRAAAPEGSLIAMPGSNQGSNNLTLKGWPLTGLEQLRSGLLQQQKPPFIQSPQPFHQLPMLTPQHQQQLMLAQQNLASPSASDDNRRLRMLLNNRNIGVTKDGLSNPVGDIVSNLGSPLQAGGPAFPRSDTDMLMKLKLAQLQHQQQNANPQQQQLQQHTLSNQQSQTSNHSMHQQDKMGGGGGSVNVDGSMSNSFRGNDQVSKNQTGRKRKQPASSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVMSMPALPHSGSSSKPLMMFSADGSGTLTSPSNQLADVDRFVEDGSLDDNVESFLSHDDTDPRDTVGRCMDVSKGFTFSEINSVRASTNKVVCCHFSSDGKLLASGGHDKKAVLWFTDSLKQKATLEEHAYLITDVRFSPSMPRLATSSYDKTVRVWDVENPGYSLRTFTGHSSSVMSLDFHPNKDDLICSCDVDGEIRYWSINNGSCARVSKGGTAQMRFQPRLGRYLAAAAENVVSILDVETQACRYSLKGHTKSIHSVCWDPSGEFLASVSEDSVRVWTLGSGSEGECVHELSCNGNKFHSCVFHPTYSSLLVVGCYQASLHPFLILFPFEYSLELWNMTENKTMTLSAHEGLIAALAVSTVNGLVASASHDKFVKLWK 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01138 907 CDD WD40 605 907 - -
Gma14g01138 907 ProSitePatterns Trp-Asp (WD) repeats signature. 670 684 IPR019775 -
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 651 686 IPR001680 GO:0005515
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 694 732 - -
Gma14g01138 907 MobiDBLite consensus disorder prediction 421 454 - -
Gma14g01138 907 Pfam LisH 10 36 IPR006594 GO:0005515
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 694 736 IPR001680 GO:0005515
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 816 IPR001680 GO:0005515
Gma14g01138 907 Pfam WD domain, G-beta repeat 870 907 IPR001680 GO:0005515
Gma14g01138 907 Pfam WD domain, G-beta repeat 690 727 IPR001680 GO:0005515
Gma14g01138 907 Pfam WD domain, G-beta repeat 772 806 IPR001680 GO:0005515
Gma14g01138 907 Pfam WD domain, G-beta repeat 649 683 IPR001680 GO:0005515
Gma14g01138 907 Pfam WD domain, G-beta repeat 610 640 IPR001680 GO:0005515
Gma14g01138 907 MobiDBLite consensus disorder prediction 144 171 - -
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 875 907 - -
Gma14g01138 907 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 907 - -
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 609 640 IPR001680 GO:0005515
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 875 907 IPR001680 GO:0005515
Gma14g01138 907 SMART Lish 8 40 IPR006594 GO:0005515
Gma14g01138 907 Gene3D - 587 737 IPR015943 GO:0005515
Gma14g01138 907 Gene3D - 738 907 IPR015943 GO:0005515
Gma14g01138 907 Coils Coil 119 142 - -
Gma14g01138 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 651 686 - -
Gma14g01138 907 MobiDBLite consensus disorder prediction 144 185 - -
Gma14g01138 907 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Gma14g01138 907 MobiDBLite consensus disorder prediction 421 556 - -
Gma14g01138 907 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 907 IPR044716 GO:0003714
Gma14g01138 907 MobiDBLite consensus disorder prediction 465 524 - -
Gma14g01138 907 SMART WD40_4 602 641 IPR001680 GO:0005515
Gma14g01138 907 SMART WD40_4 644 683 IPR001680 GO:0005515
Gma14g01138 907 SMART WD40_4 868 907 IPR001680 GO:0005515
Gma14g01138 907 SMART WD40_4 687 727 IPR001680 GO:0005515
Gma14g01138 907 SMART WD40_4 769 807 IPR001680 GO:0005515
Gma14g01138 907 SMART WD40_4 813 853 IPR001680 GO:0005515
Gma14g01138 907 MobiDBLite consensus disorder prediction 532 556 - -
Gma14g01138 907 SUPERFAMILY WD40 repeat-like 603 907 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01138 Gma-Chr14 17591451 17606957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01138 627 808 U-box Gene Family AT2G33340 32.984 2.25e-19 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Gma14g01138 WD40 0.081 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01138 - - gmx:100779972 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01949 17 34669150 34680301 Gma14g01138 14 17591451 17606957 GST
Gma14g01138 14 17591451 17606957 Gma04g00647 04 5969900 5979801 PCT
Gma14g01138 14 17591451 17606957 Gma06g00640 06 5793117 5806172 PCT
Gma04g00647 04 5969900 5979801 Gma14g01138 14 17591451 17606957 PCT
Gma06g00640 06 5793117 5806172 Gma14g01138 14 17591451 17606957 PCT