LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma14g01096	ATGGGAAAACAGTGGTCTCTCTTCAGTGTTATGGATACCCTCTTGTTGTGTCTCCTTCTTTCTTCTGAAGTTGTTCTGACAAGTTTTCTAAATGTTGGCAAAGTCTATCCGAGAATTGAAGGTTCTCAAATGAATTGGATTGACAGGGATGGCATTTTGCTTGTGTCAAATAAAGGAGAATTTGGCTTTGGCTTGGTCACCACTGCAAATGATTCTACATTGTTTCTACTAGCAATAGTCCACAAGTACTCCAACAAGGTGGTTTGGGTTGCAAATAGGGCACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAGAAGGGCAATGTCATTTTGCATAAAGGAGAAAGTGTGGTGTGGTCTTCAGATACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGAAGGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGAGTGATTTGGCAGAGTTTCAGGCACCCTACAGATACCTTGTTGCCAATGCAAGATTTCAATGAGGGAATGAAACTTGTCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTGAGATTGAATCCGGCAATGTCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGAAGGATAGCCGCAAAAAAATCATCAACAAAAATGGTGATGTGGTGACTTCAGCTACCCTTAATGCAAACTCCTGGAGGTTCTATGATGAGACTAAATCCATGTTGTGGGAATTGGATTTTGCTGAAGAATCAGATGCAAATGCCACTTGGATTGCAGGTTTGGGAAGTGATGGCTTCATCACTTTCTCCAATCTTCTAAGTGGAGGGTCAATTGTTGCTTCATCAACTAGAATACCACAAGATTCTTGCAGCACCCCAGAATCATGTGATCCCTATAACATATGCAGTGGTGATAAAAAGTGTACCTGCCCTTCTGTTCTTAGCTCTAGGCCTAATTGCCAACCTGGAAATGTCTCTCCTTGCAACTCAAAAAGCACCACTGAACTTGTCAAAGTTGATGATGGACTCAATTACTTTGCACTTGGGTTTGTTCCACCATCTTCAAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCAATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTGTTGGACAGGATTGGAAGCTTTGAGAAATCTGACAAAGATTCTGGTTTAGTGTCCTATATTAAGGTGGTATCTAGTGAAGGTGACATTAGAGACAGTAGCAAAATGCAGATAATAGTTGTTGTGATCATTGTCATATTCACATTGTTTGTCATCTCTGGTATGCTCTTTGTGGCACATAGATGCTTCAGGAAAAAGCAAGATTTGCCGGAGTCTCCTCAAGAGGATTTGGAAGATGACAGTTTCTTGGAGAGTCTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAGAAACTGCAACAAGTAACTTCTCTGTGAAGCTAGGAGAAGGGGGGTTTGGCTCAGTTTACAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCTGGGTCGAAGTAAGCATTATAGGGAGCATTCATCACCACCATTTGGTAAGGCTTAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGTTCATTGGATAAATGGATATTCAACAAGAACATAGAGGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCGAAGATTATTCATTGTGACATCAAACCAGAAAATGTACTCCTGGATGATAATTTTATGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACGCGAACAAAGCCATGTTTTCACAACACTAAGAGGCACTAGAGGCTACCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGATGTTTATAGCTATGGCATGGTGTTGCTAGAGATCATTGGGGCGAGGAAAAACTATGATCCCAGTGAAACTTCAGAGAAATCCCATTTCCCATCTTTTGCTTTTAGGATGATGGAAGAAGGGAATCTGAGAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAATGATGAAAGGGTTCACATTGCTGTGAAAGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTTAGGCCTTCCATGACCAAAGTGGTCCAAATGCTAGAGGGTTTATGCATTGTTCATAAGCCAGCAATTTGCTCTGTCCTTGGTTCTCGGTTTTACTCAACTAGTGAGGTTGGCACTTCTTCAGGACCATCAGATTGTAACAGTGAAGCCAATCTCTCTGCTGTTAGGCTTTCAGGGCCAAGATAA	2433	0.4168	MGKQWSLFSVMDTLLLCLLLSSEVVLTSFLNVGKVYPRIEGSQMNWIDRDGILLVSNKGEFGFGLVTTANDSTLFLLAIVHKYSNKVVWVANRALPVSNSDKFVFDEKGNVILHKGESVVWSSDTSGKGVSSMELKDTGNLVLLGNDSRVIWQSFRHPTDTLLPMQDFNEGMKLVSEPGPNNLTYVLEIESGNVILSTGLQTPQPYWSMKKDSRKKIINKNGDVVTSATLNANSWRFYDETKSMLWELDFAEESDANATWIAGLGSDGFITFSNLLSGGSIVASSTRIPQDSCSTPESCDPYNICSGDKKCTCPSVLSSRPNCQPGNVSPCNSKSTTELVKVDDGLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSSSGNCFLLDRIGSFEKSDKDSGLVSYIKVVSSEGDIRDSSKMQIIVVVIIVIFTLFVISGMLFVAHRCFRKKQDLPESPQEDLEDDSFLESLTGMPIRYSYNDLETATSNFSVKLGEGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFWVEVSIIGSIHHHHLVRLKGFCAEGSHRLLAYEYMANGSLDKWIFNKNIEEFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFMVKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNCAISEKSDVYSYGMVLLEIIGARKNYDPSETSEKSHFPSFAFRMMEEGNLREILDSKVETYENDERVHIAVKVALWCIQEDMSLRPSMTKVVQMLEGLCIVHKPAICSVLGSRFYSTSEVGTSSGPSDCNSEANLSAVRLSGPR	810

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma14g01096	810	ProSiteProfiles	Protein kinase domain profile.	491	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma14g01096	810	CDD	B_lectin	47	158	IPR001480	-
	Gma14g01096	810	PIRSF	SRK	8	808	IPR024171	GO:0004674
	Gma14g01096	810	SMART	serkin_6	491	761	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma14g01096	810	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	612	624	IPR008271	GO:0004672\|GO:0006468
	Gma14g01096	810	SMART	blect_4	45	158	IPR001480	-
	Gma14g01096	810	Pfam	Protein kinase domain	494	759	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma14g01096	810	Gene3D	Phosphorylase Kinase; domain 1	460	565	-	-
	Gma14g01096	810	Gene3D	Transferase(Phosphotransferase) domain 1	566	770	-	-
	Gma14g01096	810	ProSiteProfiles	Bulb-type lectin domain profile.	38	156	IPR001480	-
	Gma14g01096	810	SUPERFAMILY	alpha-D-mannose-specific plant lectins	84	209	IPR036426	-
	Gma14g01096	810	ProSitePatterns	Protein kinases ATP-binding region signature.	497	520	IPR017441	GO:0005524
	Gma14g01096	810	CDD	STKc_IRAK	497	764	-	-
	Gma14g01096	810	Gene3D	-	47	155	IPR036426	-
	Gma14g01096	810	Pfam	D-mannose binding lectin	87	168	IPR001480	-
	Gma14g01096	810	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5	1	810	-	-
	Gma14g01096	810	SUPERFAMILY	Protein kinase-like (PK-like)	470	762	IPR011009	-
	Gma14g01096	810	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	1	810	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma14g01096	Gma-Chr14	14679902	14682334	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma14g01096	469	770	Receptor kinase-like Gene Family	AT5G20050	47.634	5.68e-91	292

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gma14g01096		Pkinase	2.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma14g01096	-		-	gmx:100787985	1613.97

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma14g01096	14	14679902	14682334	Gma14g01096	14	14679902	14682334	ECH
	Gma14g01096	14	14679902	14682334	Gma17g02011	17	36066057	36068495	ECH
	Gma15g00078	15	656600	659548	Gma14g01096	14	14679902	14682334	ECH
	Gma17g02011	17	36066057	36068495	Gma14g01096	14	14679902	14682334	GST
	Gma14g01096	14	14679902	14682334	Gma04g00618	04	5653411	5658391	PCT
	Gma14g01096	14	14679902	14682334	Gma06g00603	06	5466232	5468685	PCT
	Gma04g00618	04	5653411	5658391	Gma14g01096	14	14679902	14682334	PCT
	Gma06g00603	06	5466232	5468685	Gma14g01096	14	14679902	14682334	PCT