Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01079 ATGCTCTTCCCCTTCATTCAAAACTTGTTCACCGACCCCGGTGGCTGCCTCCGTGCTTTGGTTGTAGTTCCCACCCACGACTTTGCTTTGCAGGTTAAGCGTGTCTTCGACGCCCTTGCATCACTGTTGGGTCTCCGTATTGGCTTGGCTGCTGGTCAATCTTCGCTTCGCCACGAGTTTTCTAGCCTCATTTTTCTACCCAGAGAAGATGACGGTCCAAATCCTGGGTTTTTGTCTTCGTTGTGGTTCCAAAGCAAGGTCAACATATTGGTAGCGACCCTTGGAAGGCTAGTGGACCATGTCAACAAGTTGTCGTTGAAGCATCTTCGTTATCTCGTGGTTGACGAAGCAGATCGATTTCTACATGAGGACTACCAGTCCTGGTTGCCTACTGTGATTAAATTAACTCAGTTTGGGCTGGCAAAGATAGTTTTATTTGCTATGTTAACTCGGGGCCCAGGAAGGCTTGCTCAACTTATTTTGCATTACCTTTTATTCCTGAGTGCTGGGAAAATGTGTTATCGGCTCCCAGAATATTTGGAATGTTACAAACTGATATGTGAAAGAAAGGTCAAACCCTTGTATTTGGTTGCCCTTTTGAAATCCCTAGGAGAAGAAAAATGCATAGTTTTTACAAGATTTGTGGAATCAACACATCATCTCTGCAAATTGCTAAATTTTTTTGGTGATCTTAAAATTGGTATCAAGGAGTTTTCTGGTCTAAAACATCAACAGGTAAGAAGCAAGACAGTGGGTGAATTTCAGAGAAGGGAGTTTCAAGTTCTTGTATCTTCTGATGCAATGACTCGGGTAATGGATGTTGAAGGGTTAAGAAATGTCATTAATTATGACGTGCCCAAATACACAAAGACGTATGTTCATCGACCTGGTAGAACTGCAAGAGCTGGCCAGACTGGGTGTTGCTTTACATTGATGTCAAAAGATGAGGTATGA 954 0.4308 MLFPFIQNLFTDPGGCLRALVVVPTHDFALQVKRVFDALASLLGLRIGLAAGQSSLRHEFSSLIFLPREDDGPNPGFLSSLWFQSKVNILVATLGRLVDHVNKLSLKHLRYLVVDEADRFLHEDYQSWLPTVIKLTQFGLAKIVLFAMLTRGPGRLAQLILHYLLFLSAGKMCYRLPEYLECYKLICERKVKPLYLVALLKSLGEEKCIVFTRFVESTHHLCKLLNFFGDLKIGIKEFSGLKHQQVRSKTVGEFQRREFQVLVSSDAMTRVMDVEGLRNVINYDVPKYTKTYVHRPGRTARAGQTGCCFTLMSKDEV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01079 317 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 167 IPR014001 -
Gma14g01079 317 Pfam Helicase conserved C-terminal domain 192 303 IPR001650 -
Gma14g01079 317 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 3 312 - -
Gma14g01079 317 CDD SF2_C_DEAD 180 311 - -
Gma14g01079 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 316 IPR027417 -
Gma14g01079 317 Pfam DEAD/DEAH box helicase 2 136 IPR011545 GO:0003676|GO:0005524
Gma14g01079 317 Gene3D - 178 317 IPR027417 -
Gma14g01079 317 PANTHER RNA HELICASE 3 312 - -
Gma14g01079 317 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 113 121 IPR000629 -
Gma14g01079 317 Gene3D - 4 173 IPR027417 -
Gma14g01079 317 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 195 317 IPR001650 -
Gma14g01079 317 SMART helicmild6 222 303 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01079 Gma-Chr14 14137421 14138853 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01079 18 316 Eukaryotic Initiation Factors Gene Family AT3G13920 22.591 3.65e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01079 K14807 - gmx:100777841 629.402