Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01078 ATGCCAGAGAAGTTGCACTTGGCATCAACAACCAAGCCTCCTGGCACACTAAGTTGCATCACTCCTCGTCGTTTTTGCTCAATACGGAAGGTTTTGGGGAGAATTATTAGGGTGGACCATGTTGATAAGTATAAGAAGAAGGAGGAGGAGGATGAAGAGACAGAGCGTCAGAAGAGGGAGGCGCATGGCGTTTGCCGTGCTTTCCAAATAGGTGAATGCACTCGGGGAGCTAGCTGCAAGTTTTCTCATGATGAGCAATTCTACCATGGATGCGCCACCTTGTCGACATCACTCGCTGTCAAGAACTCCCCGTTTGTAGTGTTCCTTTGA 330 0.4879 MPEKLHLASTTKPPGTLSCITPRRFCSIRKVLGRIIRVDHVDKYKKKEEEDEETERQKREAHGVCRAFQIGECTRGASCKFSHDEQFYHGCATLSTSLAVKNSPFVVFL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01078 109 Gene3D - 45 105 - -
Gma14g01078 109 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 30 86 - -
Gma14g01078 109 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 30 86 - -
Gma14g01078 109 SMART c3hfinal6 59 85 IPR000571 GO:0046872
Gma14g01078 109 Pfam CCCH-type zinc finger 64 84 IPR041367 -
Gma14g01078 109 ProSiteProfiles Zinc finger C3H1-type profile. 59 86 IPR000571 GO:0046872
Gma14g01078 109 SUPERFAMILY CCCH zinc finger 62 84 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01078 Gma-Chr14 14136131 14137194 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma14g01078 zf-CCCH_4 1.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01078 K13107 - gmx:100792988 100.908