Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01073 ATGGAGGAAGAAAAGCAGCAGCCAAGTGTGGTGGTTCTACCATGGATGCGCCACCCTGTCGACATCACTCGCTATCAAGAACTCCCTATATGTAGTGTTCCTTTGATGAAACGCAGGTTACAGTCGGTACTAGAGAAGAACATGGGAATCTCGAAGTTGTTCCCGGTTCAGGTCACACTCTGTGGCAAAACTTTGGCCTATGCTTTTCCCATCGTTCAAAACTTGTCCACCGACACCGGTGGCCGCCTCCGTGCTTTGGTTGTAGTTCCCACCCGCGACCTTTCTTTGCAGGTTAAGCGTGTCTTCGACGCCCTTGCATCATTGTTGGGTCTCCGTATTTGCTTGGCTACTGATCAATCTTCGCTTCGCCACAAGCTTTCTAGCCTCATTTATCTACCTGGAGAAGACGATGGTCAAGATCCTGGGTTTTTGTCTTCGTTGTGGTTCCAAAGCAAGGTCGACATATTGGTAGTGACCCCTGGAAGGCTAGTGGACCATGTCAACAAGTTGTCGTTGAAGCATCTTCGTTATCTCATGGTTGACGAAGCAGATCGATTGCTACGCGAGGACTACCAGTCCTGGTTACCTACTGTGCTTAAATTAACTCAATCTAGGCTGACAAAGATAGTTTTATCTGCTACATTAACTCGAGACCCAGGAAGGCTTGCTCAACTTAATTTGCATCACCCTTTATTCCTGAGTACTGGGAAAATGCGTTATCGACTCCCAGAATATTTGGAATGTTACAAACTGGTATATGACACTGCATAG 771 0.4695 MEEEKQQPSVVVLPWMRHPVDITRYQELPICSVPLMKRRLQSVLEKNMGISKLFPVQVTLCGKTLAYAFPIVQNLSTDTGGRLRALVVVPTRDLSLQVKRVFDALASLLGLRICLATDQSSLRHKLSSLIYLPGEDDGQDPGFLSSLWFQSKVDILVVTPGRLVDHVNKLSLKHLRYLMVDEADRLLREDYQSWLPTVLKLTQSRLTKIVLSATLTRDPGRLAQLNLHHPLFLSTGKMRYRLPEYLECYKLVYDTA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01073 256 PANTHER RNA HELICASE 59 252 - -
Gma14g01073 256 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 179 187 IPR000629 -
Gma14g01073 256 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 59 233 IPR014001 -
Gma14g01073 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 234 IPR027417 -
Gma14g01073 256 SMART ultradead3 49 245 IPR014001 -
Gma14g01073 256 Pfam DEAD/DEAH box helicase 59 219 IPR011545 GO:0003676|GO:0005524
Gma14g01073 256 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 59 252 - -
Gma14g01073 256 Gene3D - 20 241 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01073 Gma-Chr14 14111448 14112351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01073 62 215 Eukaryotic Initiation Factors Gene Family AT1G72730 27.564 1.06e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01073 K14807 - gmx:102664148 423.705