Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01062 ATGGCCACGAAAACCGCGAAGCTCTACCGCAGGGTGCAGCAACGGCATTGGGGCAAGTGGGTCACCGAAATCAGTCTCCCCAAGAACCGCACGCGTCTTTGGCTCGGAACATTCGACACCATAGAGGAAGCAGCATTAGTGTACGACAACACTGCGTTTAAGCTCAGAGGCAAGTTTGCGCGTCTCAATTTCCCTCATCTACGACACCACGAAGCGTTTTTTTTCGGTGAGTTCGAAGATTACAGGCCTCTACCTTCTTCCGTGGATTCGAAGCTGCAAGCTATTTGCAAAAGCTTGGTGAAACAAGAGGAAAAGTCGTGTTGCTTTGTCAAAGACGTGAAGCCTGTTATACACGCTACTGAGCTAGCAGAGGTGGAGTCTGGCGTGGCAAAATTGAACGTTGAATATGTTTATCCTGAGTTTGAGGATTTTAAGGTCGAGAACGAGAACCCAATGttgccctccaattccctagtagttttcttatcttcattttaa 498 0.4478 MATKTAKLYRRVQQRHWGKWVTEISLPKNRTRLWLGTFDTIEEAALVYDNTAFKLRGKFARLNFPHLRHHEAFFFGEFEDYRPLPSSVDSKLQAICKSLVKQEEKSCCFVKDVKPVIHATELAEVESGVAKLNVEYVYPEFEDFKVENENPMLPSNSLVVFLSSF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01062 165 SUPERFAMILY DNA-binding domain 8 66 IPR016177 GO:0003677
Gma14g01062 165 SMART rav1_2 8 71 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 Pfam AP2 domain 12 57 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 3 149 - -
Gma14g01062 165 CDD AP2 7 67 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 PRINTS Ethylene responsive element binding protein signature 31 47 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 PRINTS Ethylene responsive element binding protein signature 9 20 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 Gene3D AP2/ERF domain 8 66 IPR036955 GO:0003700|GO:0006355
Gma14g01062 165 ProSiteProfiles AP2/ERF domain profile. 8 65 IPR001471 GO:0003700|GO:0006355
Gma14g01062 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01062 Gma-Chr14 13835311 13835808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01062 1 124 AP2-EREBP Transcription Factor Family AT1G78080 57.937 4.33e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma14g01062 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01062 K09286 - gmx:100797648 274.633