Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01056 ATGGCGTACCATAACCACAACCTTTCACAGCAAGACCTTCCACTCCACCATTTCCCGAACCAATCCATATTACCAGACCAACAACAACAACTTCCTTCCTCACCCGAACCAAACTCCAAACCTCCCTCCGATCTCCAAACCGCGCCCAATTGGCTCAACGACGCGCTTCTCCGCACTCACTACACCGAGACCACCACCAACGACGCCACAACCAACACCGCCACCGTCGCCGCCGCTGCCGCCAACAGTAATGTTAACGGTTCCAATTTCCTGAACCTCAACCCCGGTGCCTCCGACGCGCAGTGGCCGGCGCTCCACCGCCACCCTGGCGAGGTCATCGACGCCGGCGCAGGGGACTCCATGGTGGAGCACGCCGATTTGAAGGGCGGCGGCGGAGACGGTGGTGGCGACGCCGTGAATTGGCAGATTGGACGGTGGAAGGCGGAGATTCTGCAGCACCCGCTGTACGAGCAGCTGCTGTCGGCGCACGTGTCGTGCCTCCGGATCGCCACGCCGGTGGACCAGCTGCCGAGGATCGACGCGCAGCTGGCGCAGTCGCAGAATGTGGTCGCGAAATACGCAGCTTTCGGACACAACAACATCGTCGCCGATGACAAAGAACTCGATCAGTTCATGTCGCACTATGTTTTGTTGCTCTGTTCCTTCAAAGAACAATTGCAGCAGCATGTCCGGGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGATATAGAGCAATCATTGCAGAGTCTAACAGGAGTTTCACCTGGAGAAGGTACAGGGGCAACAATGTCTGATGATGAAGATGACCAAGTAGATAGTGATGCCAATCTCTTTGATAGTAGTTTCGATGGGGCAGATGGCATGGGGTTTGGCCCTCTTGTTCCTACAGAGAGCGAGAGGTCCCTCATGGAGCGAGTAAGACAAGAATTAAAGCATGAACTGAAACAGGGTTATAAGGAGAAAATTGTAGATATAAGAGAGGAAATCTTGCGCAAGAGAAGAGCTGGGAAACTTCCTGGTGACACAACTTCTGTTCTTAAAGCTTGGTGGCAATCACATTCCAAGTGGCCTTACCCTACCGAGGAGGATAAGGCAAGGTTGGTGCAGGAAACTGGATTGCAATTAAAGCAGATTAATAATTGGTTTATCAATCAAAGGAAGAGGAATTGGCACAGCAATCCTTCAACTTCAACTGTCTTGAAGAGCAAACGCAAAAGGTGA 1224 0.527 MAYHNHNLSQQDLPLHHFPNQSILPDQQQQLPSSPEPNSKPPSDLQTAPNWLNDALLRTHYTETTTNDATTNTATVAAAAANSNVNGSNFLNLNPGASDAQWPALHRHPGEVIDAGAGDSMVEHADLKGGGGDGGGDAVNWQIGRWKAEILQHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYAAFGHNNIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPGEGTGATMSDDEDDQVDSDANLFDSSFDGADGMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01056 407 CDD homeodomain 333 394 IPR001356 GO:0003677
Gma14g01056 407 MobiDBLite consensus disorder prediction 1 20 - -
Gma14g01056 407 SMART HOX_1 332 397 IPR001356 GO:0003677
Gma14g01056 407 SMART KNOX1_2 144 188 IPR005540 GO:0003677|GO:0005634
Gma14g01056 407 SMART ELK_2 310 331 IPR005539 GO:0003677
Gma14g01056 407 ProSiteProfiles 'Homeobox' domain profile. 330 393 IPR001356 GO:0003677
Gma14g01056 407 MobiDBLite consensus disorder prediction 25 48 - -
Gma14g01056 407 Pfam ELK domain 310 331 IPR005539 GO:0003677
Gma14g01056 407 ProSiteProfiles ELK domain profile. 310 330 IPR005539 GO:0003677
Gma14g01056 407 SUPERFAMILY Homeodomain-like 332 395 IPR009057 -
Gma14g01056 407 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 36 407 - -
Gma14g01056 407 Pfam KNOX1 domain 147 187 IPR005540 GO:0003677|GO:0005634
Gma14g01056 407 Gene3D - 329 401 - -
Gma14g01056 407 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 36 407 - -
Gma14g01056 407 SMART KNOX2_2 198 253 IPR005541 GO:0003677|GO:0005634
Gma14g01056 407 Pfam Homeobox KN domain 350 389 IPR008422 GO:0003677|GO:0006355
Gma14g01056 407 Pfam KNOX2 domain 203 252 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01056 Gma-Chr14 13606044 13610275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01056 1 407 Homeobox Transcription Factor Family AT5G25220 63.656 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Gma14g01056 KNOX2 5.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01056 - - gmx:100812596 774.622