Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01043 ATGGAAGGACTAAGCATGAAGGAGCCATACTTTTGTGACAGACCAAGTTCAACACGCATCTTCTCTTCTTCTGATCCTCCAGAGGCTCCCCCAAGCCCAAGTACCCCACTTCAGCATTCGCATGAAAAGAAGAAACAGCTATGTGTTGAGGAAGAAGAGGAATTAGAAAAGGAGCCAAAGCAACATGTTAGTGTTACCCTTTTGGATCTGAATATTATCTCAGGTGAAGATGATAATTCATGCACTCCAGAAGGACCAGAACTCAACCTCATCACTTGTTTGGATGTGGGGTCATCATCCAATAATGCTAATTCTTCATCAGAAACAACAACACCTCTTGGTGGTTCTTCTGATCATACTGAGCCTAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGTGGCCACCAAAATGCACACAAGAGGGAGAGATCAATTGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTCGGCCTTCCCCTTTTGCACCATAACAACAACATCCGTTTTGCAAGCATGGCTTCTCTACCCCTTTATCATAGCAATAGAGGAACTCTTGGAATTCAGGCACACTCCATGATCCAGAAGCCTTCTTCTTCTCATCTTCATGTGAATGGCTTTGGAGGCTCTTATGCACATCATCATGGTTGGTCAAGACCAATCATTGATCAACAACCCGGAATAGCAAAGCTTGCTGCGCCAGATTTTCATCACAGAACAAAATCAGCATTATCATCATCACAAAGCAGCGTTGGTAGGTTTGAAATGGTTAATAGTAGTAATACCATGTTGAATTCTGCAGCCACTAATAACGAAATCGGTGGATGTGTGGCTATTGGTGGAACTCGTTTGAAGAGTACTACTAATCAAGAAGAAATGAAGCACCTTGATTTGTCCCTAAAGCTCTGA 939 0.4324 MEGLSMKEPYFCDRPSSTRIFSSSDPPEAPPSPSTPLQHSHEKKKQLCVEEEEELEKEPKQHVSVTLLDLNIISGEDDNSCTPEGPELNLITCLDVGSSSNNANSSSETTTPLGGSSDHTEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHHNNNIRFASMASLPLYHSNRGTLGIQAHSMIQKPSSSHLHVNGFGGSYAHHHGWSRPIIDQQPGIAKLAAPDFHHRTKSALSSSQSSVGRFEMVNSSNTMLNSAATNNEIGGCVAIGGTRLKSTTNQEEMKHLDLSLKL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01043 312 MobiDBLite consensus disorder prediction 99 118 - -
Gma14g01043 312 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 312 IPR044246 GO:0009788
Gma14g01043 312 SUPERFAMILY beta-beta-alpha zinc fingers 121 152 IPR036236 -
Gma14g01043 312 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 312 - -
Gma14g01043 312 Gene3D Classic Zinc Finger 99 165 - -
Gma14g01043 312 ProSitePatterns Zinc finger C2H2 type domain signature. 127 147 IPR013087 -
Gma14g01043 312 MobiDBLite consensus disorder prediction 38 61 - -
Gma14g01043 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 152 IPR013087 -
Gma14g01043 312 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01043 Gma-Chr14 13057323 13058903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01043 32 312 C2H2 Transcription Factor Family AT5G10970 39.661 7.01e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g01043 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01043 - - gmx:100809569 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01043 14 13057323 13058903 Gma04g00581 04 5264815 5265942 PCT
Gma14g01043 14 13057323 13058903 Gma06g00567 06 5071879 5073020 PCT
Gma04g00581 04 5264815 5265942 Gma14g01043 14 13057323 13058903 PCT
Gma06g00567 06 5071879 5073020 Gma14g01043 14 13057323 13058903 PCT