Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01040 ATGGCACCTGTTTTGCCTCCCGGTTTCAGATTCCACCCTCCTGACGAAGAACTTGTTGCTTACTACCTTAAAAGACAGATTAATGGCCGAAAGATTGAGTTGGAGATCATATCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGTTAAAGCAAGAGCTCCACCTCGTCGAGTGATAAAGCAAGAAGTTAAAGCGTATGGATTATTTGGTTTGACAATAGTTCGTCCCCCAAGATTTGATTGCAGAGAAGCTGCAGAACGTGTGGCTACCCCTGGGGTCACTATTGGGCTAGTTTGGACTGCTTTTGGTGGAGAAGTTTAG 330 0.4515 MAPVLPPGFRFHPPDEELVAYYLKRQINGRKIELEIISEVDLYKCEPWDLPVKARAPPRRVIKQEVKAYGLFGLTIVRPPRFDCREAAERVATPGVTIGLVWTAFGGEV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01040 109 Pfam No apical meristem (NAM) protein 6 55 IPR003441 GO:0003677|GO:0006355
Gma14g01040 109 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 57 - -
Gma14g01040 109 Gene3D NAC domain 14 72 IPR036093 GO:0003677|GO:0006355
Gma14g01040 109 PANTHER NAC DOMAIN-CONTAINING PROTEIN-RELATED 1 57 - -
Gma14g01040 109 SUPERFAMILY NAC domain 3 54 IPR036093 GO:0003677|GO:0006355
Gma14g01040 109 ProSiteProfiles NAC domain profile. 5 109 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01040 Gma-Chr14 13014470 13015638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01040 1 59 NAC Transcription Factor Family AT1G65910 76.667 1.23e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma14g01040 NAM 2.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01040 - - vra:106763980 108.612