Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01036 ATGACCGTGGTGGAGGATCATAGAATGGATGATCTCAGAGACCAGTTCCCTATTGGAATGCGTGTTCTTGCTGTTGATGATGACTCAACATGTCTCATGGTTCTGGAGACTCTGCTTAGAAGATGTCAATACCATGTAACCACTACTAAAAATGCAATAACGGCATTGAAGTTGTTGAGAGAAAACAAAACCATGTTTGACCTGGTAATCAGTGATGTCCACATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGGCTTGAGATGGACCTACCAGTCATAATGTTGTCTGTAAATGATGACCCTAAGATGGTGATGAAGGGAATTACACATGGAGCTTGTGATTATCTTCTGAAACCTGTTAGAATTGAGGAGCTACAGAACATTTGGCAGCATGTAATCAGGAGGAAGAAGATCGATTCAAAGGAGCGGAACAAAACCAGTGACCATGACAAACCTAATGCTGATAATGGCAATGGAAGAGTGTCAGCAGGAACAGGAAATTCAGATCAAAATGGAAAGCCTTCCAAAAAGAGGAAAGATCAGGATGAAGATGATGAGGAGGAGAACGAGGATGGCCATGACAATGAGGACTCATCAACTCTGAAGAAGCCTCGAGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTTCTGCTGTTAATCAACTAGGCATTGACAAGGCTGTACCTAAAAAGATTCTTGACTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCCAGCCACCTCCAGAAATATAGGCTTTATCTGAAAAGAATTAGCTGTGTGGCGAACCGACAGGCTAATCTGGTGGCAGCCTTAGGCACTGCAGATTCATCTTATTTGAGAATGGGTTCTCTGAGTGGGGTTGGACATATGCAGACATTGACTGGTCCTCAACAGTTTCATAACAATGCTTTCAGACCCTTTCCACCTGGTGGAATGATTGGTAGATTGAATGCTTCTGTTGGTCTGAATATGCATGGGATATCTTCTTCAGAAGCTCTTCAGTTGAGTCATGCACAAAATTTAAACAAATCCATAAATGATCCACTTAAGTTCCAATCAGCCATAGCTTGTGGTAATCAAAATGGTATCCAGGGAATGCCAATGTCTATAGGCCTTGATCAATTGCAACATAATAAGGGTGTTAGTGTTGGTCCTATTCAAAACATGTCCTCCCTAATTGATGATAGACCAACTTTTGGCGTGTCAAAGAAACTCTCAGATCAAACACAAAAAGTAACAATTGGTTGCTCACCCTCTCCGGTTTTGGACATCTCAAACAATGACTTGGTATTGAAAGCAGATAGTGAAAACACACAAGGGGGCGGAGTATATGAGAATTTAACTTCAGTAGCCTCTCAGCATTCCCAATTTTCTCTCCCTTTGTTGGATCATGGTAGGTGTAGTGATATTTGGTCAAGTCCTATGCAGTCATCTGGGACAAATTCTTACCCTCCAAGTGAAACTTTGCAAGGGGGGAATCTGAGTGGTCAATCATCCATTACTTCACTGTTTAATCAATCCCATGATTCACCGACAGATATGCACTCTCAAGGACTCATTTTTACAAATAACTTGGGACAAATGAGCAATAATGTGCCATTTCAAGGCTGGGATGACAATAATCATGATAGTAATTACGATGCAAATGTTATTGGTAATTCAATAGACACTCTGATTGATCCAGAAGGCCATACTTCTATCAACTCAAACTATAATAGAAATCTGGACTTCAATTTCTGTAATCCCTTACAGATGAAGCATGATGGAATTATGGGATTGAGTGAAGAAAACTCATTGAAACAACAATATGGGTACATCATGAACCGGCAGAAGTCTCAAAACAGTAGTGCCACTAATAATCTTGGTTCATTGGAAGACTTTGCCAGTTCAATGATGAAACAGAAACAAGACAAGGTGAAATTCTTGGACGGGTCATACTTATGCAACAATAATTACCCGGCCGGAACATCCATGTGA 1998 0.4109 MTVVEDHRMDDLRDQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVIRRKKIDSKERNKTSDHDKPNADNGNGRVSAGTGNSDQNGKPSKKRKDQDEDDEEENEDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGPQQFHNNAFRPFPPGGMIGRLNASVGLNMHGISSSEALQLSHAQNLNKSINDPLKFQSAIACGNQNGIQGMPMSIGLDQLQHNKGVSVGPIQNMSSLIDDRPTFGVSKKLSDQTQKVTIGCSPSPVLDISNNDLVLKADSENTQGGGVYENLTSVASQHSQFSLPLLDHGRCSDIWSSPMQSSGTNSYPPSETLQGGNLSGQSSITSLFNQSHDSPTDMHSQGLIFTNNLGQMSNNVPFQGWDDNNHDSNYDANVIGNSIDTLIDPEGHTSINSNYNRNLDFNFCNPLQMKHDGIMGLSEENSLKQQYGYIMNRQKSQNSSATNNLGSLEDFASSMMKQKQDKVKFLDGSYLCNNNYPAGTSM 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01036 665 Pfam Myb-like DNA-binding domain 208 258 IPR001005 -
Gma14g01036 665 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Gma14g01036 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 648 - -
Gma14g01036 665 Pfam Response regulator receiver domain 22 130 IPR001789 GO:0000160
Gma14g01036 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 262 IPR017930 -
Gma14g01036 665 SUPERFAMILY CheY-like 19 144 IPR011006 -
Gma14g01036 665 PIRSF RR_ARR_type-B 1 664 IPR017053 GO:0003677|GO:0003700|GO:0009736
Gma14g01036 665 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
Gma14g01036 665 Gene3D - 205 265 - -
Gma14g01036 665 MobiDBLite consensus disorder prediction 143 204 - -
Gma14g01036 665 CDD REC_typeB_ARR-like 22 136 - -
Gma14g01036 665 SMART REC_2 20 132 IPR001789 GO:0000160
Gma14g01036 665 MobiDBLite consensus disorder prediction 480 499 - -
Gma14g01036 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 648 IPR045279 GO:0009736
Gma14g01036 665 MobiDBLite consensus disorder prediction 143 158 - -
Gma14g01036 665 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Gma14g01036 665 Gene3D - 20 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01036 Gma-Chr14 12912912 12918464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01036 14 645 Response Regulator Gene Family AT2G25180 43.779 2.33e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma14g01036 Response_reg 4.9e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01036 - K14491 gmx:100803879 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02071 17 37755679 37761531 Gma14g01036 14 12912912 12918464 GST
Gma14g01036 14 12912912 12918464 Gma04g00580 04 5247822 5252465 PCT
Gma14g01036 14 12912912 12918464 Gma06g00565 06 5049396 5054378 PCT
Gma04g00580 04 5247822 5252465 Gma14g01036 14 12912912 12918464 PCT
Gma06g00565 06 5049396 5054378 Gma14g01036 14 12912912 12918464 PCT