Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01034 ATGAGTAATTCTTTGAAAGCTTCAAAACTAATGATCAATGAACTTGTGTTGGAAATACAAGAGTTCAGTGAGAGGTCTTTTGTTGATGTTGTTACTTCTGATTTGAGGTCAAATAAGTTTTGGCGCCTCCTGGCCGAACCAGTTCACATCTTTCAGGATCGAGAAATTGTTTGTGTTACTGTGGACATGATTACAAAAATAGTGATGGATAATCATTCATGGTGTTACCCAGCTTGTAGCCAATGCCACAAAAAGACTAACATAGACGTTGTGCCATTCACATGTGGATGTGGCAAACACAATGATAAACCTGTCTTGAGGTATCGAATTGAAGTGATGGTTAAAGACAAAGACAAAGATACTAAATTTTTGCTCTGGGCCCGTGAATGTGCAGAGTTGATTGGCCAATCAGTGGATGAAGTTAACAGGCTAAAAATGGAAGGTGGTGATGTTGATTTAGATGCTTCTCCTCAGGCCCTTGATAGGCTGCTAGGTTGTGTTCTTGCATTTAAAGTCAAGGTTCAGCCAAAGTTTGGCAATGCTGTTGTTCTTAAATATTCAAATGAGTTAGATTTGATCAATGTTGTGCTGGATATGCTGGCTGATACTGAGCCATTTTCCAAGATGGATAGTCTAGTGGTTGAGTGCACGGATCCTACACAAGCTGAATCTCAATTTGTGTCAGTGACAATAGATCATGACCCACTTCTAAGGGTTCCATTAACACCCACAAAGCGCTTATCAACTGATGAATTGGATGATAAAGCAAGAAGTTGTGAGATTTCACCCGCGCAACTTTCCTCTAACAAACTAGCAAGACCTTCTGCAACTGAATGA 837 0.4002 MSNSLKASKLMINELVLEIQEFSERSFVDVVTSDLRSNKFWRLLAEPVHIFQDREIVCVTVDMITKIVMDNHSWCYPACSQCHKKTNIDVVPFTCGCGKHNDKPVLRYRIEVMVKDKDKDTKFLLWARECAELIGQSVDEVNRLKMEGGDVDLDASPQALDRLLGCVLAFKVKVQPKFGNAVVLKYSNELDLINVVLDMLADTEPFSKMDSLVVECTDPTQAESQFVSVTIDHDPLLRVPLTPTKRLSTDELDDKARSCEISPAQLSSNKLARPSATE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01034 278 MobiDBLite consensus disorder prediction 261 278 - -
Gma14g01034 278 CDD RPA1_DBD_C 49 186 IPR013955 -
Gma14g01034 278 SUPERFAMILY Nucleic acid-binding proteins 55 179 IPR012340 -
Gma14g01034 278 MobiDBLite consensus disorder prediction 248 278 - -
Gma14g01034 278 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 3 127 - -
Gma14g01034 278 PANTHER REPLICATION FACTOR A 1, RFA1 3 127 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma14g01034 278 Gene3D - 36 193 IPR012340 -
Gma14g01034 278 Pfam Replication factor-A C terminal domain 69 151 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01034 Gma-Chr14 12856916 12858329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01034 50 152 Core DNA Replication Machinery Family AT5G61000 31.429 3.12e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01034 - - gmx:102661170 474.167