Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01027 ATGGCAAACTACCACCGCAACAACGTAGAAAACGTCGTCCTCGGCCACCACCACCGTTCCAAGTCCGCCTCCGTCGCCGGCCACACCTTCCGCCTATGTACCGCCGCCTCCTTCCGCCGCCTCATCTTTGACGCCGTCAGCTGCGGCGCCAGCTCTCGCTACGCCGCGAGATCCAACACCTCCTCCGACGGCGAGAAACAGCAAAAGCAAAAACCTAAGACGTCGTCGAGGAAGCCGAACAATGCGAAGTCGGAGAAGCTCTCGGATCTGCTGAGCATTGCGGAGGCTGAAGCCGACGTGGAAACGAAGAAGAAGGAAGAAAAGCTGGAAGAACTGAAGCTCCTCGTGAAGGAGCTTCAGCAGCACGAAGAAGTAGATGATTCAACGAAGAAAAAAAGAGAAGCTGCGGCGAAAGTGAGGTTGTTGGCGAAAGAGGATTTGGAAGTAAGAGGAACGCTCGCTATGCTAGGAGCCATTCCTCCTCTCGTCGCAATGCTCGATGAAACCGAACTAAACGACGTCGATTCGCTCATCGCGTCGCTCTACGCGCTGCTTAACCTCGGCATCGGAAACGACGCGAACaAAGCGGCTATTGTGAAAATTGGGTCTGTTGAGAAGATGCTCAAGTTTATTGAATCTCCAGATGATCTAGATTCTTCGGTTTCTGAAGCAATTGTTGCAAATTTCCTTGGATTGAGTGCTTTGGATTCGAACAAGCCCATGATTGGGTCTTCGGCTTCAATTTCATTCTTAGTTAGAACCCTTCAGAGTTTAGATGATAAGAGCAGTTCCCAAGCCAAGCAAGATGCTCTCCGAGCATTGTACAATCTTTCAATCTTCCCAGGCAATGTTTCATTCATTTTGGAAACCGATTTGGTAGTGTTTCTGGTGAACTCAATAGGGGACATGGAGGTTACTGAAAGATCCCTTGCAACTCTCAGCAATATAGTGTCCACCCGAGAGGGTAGAAAGGCGATCAGCACGGTGCCGGATTCTATCCCAATTTTGGTGGATGTGTTGAATTGGACTGATTCGCCGGAATGCCAGGAGAAGGCATCATACATTTTGATGGTTATGGCACACAAGTCCTATGGTGACAAGCAGGCCATGATTGAGGCAGGGGTTGCATCATCCCTGCTTGAGTTGTCCCTTTTGGGTTCCACATTGGCTCAGAAAAGGGCCTCAAGAATATTGGAGATTTTGAGGGTGGACAAAGGGAAGCAAGTTTCTGGGAGCTATGGCTTGGGTGCAGCTGTCTCTGCCCCTATTTGCGGCTCTTCGTCGGCGAGGCCAGACGGAGGAGGAGGAGGAAGAGAGTGTTTTGAGGAGGACGAAGAGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTAAAGAGGGCCAACTTGCCTCACGATATCGCGCCATCAGATCATTTTATGTCACTCACTTCAAGTTCTACTTCAAAGAGCCTGCCATTTTGA 1503 0.4977 MANYHRNNVENVVLGHHHRSKSASVAGHTFRLCTAASFRRLIFDAVSCGASSRYAARSNTSSDGEKQQKQKPKTSSRKPNNAKSEKLSDLLSIAEAEADVETKKKEEKLEELKLLVKELQQHEEVDDSTKKKREAAAKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDETELNDVDSLIASLYALLNLGIGNDANKAAIVKIGSVEKMLKFIESPDDLDSSVSEAIVANFLGLSALDSNKPMIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIFPGNVSFILETDLVVFLVNSIGDMEVTERSLATLSNIVSTREGRKAISTVPDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVASSLLELSLLGSTLAQKRASRILEILRVDKGKQVSGSYGLGAAVSAPICGSSSARPDGGGGGRECFEEDEEMMSEEKKAVKQLVQQSLQNNMRKIVKRANLPHDIAPSDHFMSLTSSSTSKSLPF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01027 500 Coils Coil 441 461 - -
Gma14g01027 500 SMART arm_5 280 318 IPR000225 GO:0005515
Gma14g01027 500 SMART arm_5 146 189 IPR000225 GO:0005515
Gma14g01027 500 SMART arm_5 191 234 IPR000225 GO:0005515
Gma14g01027 500 SMART arm_5 235 279 IPR000225 GO:0005515
Gma14g01027 500 SMART arm_5 322 361 IPR000225 GO:0005515
Gma14g01027 500 Coils Coil 91 125 - -
Gma14g01027 500 MobiDBLite consensus disorder prediction 64 88 - -
Gma14g01027 500 Gene3D - 301 466 IPR011989 -
Gma14g01027 500 MobiDBLite consensus disorder prediction 54 88 - -
Gma14g01027 500 Gene3D - 51 300 IPR011989 -
Gma14g01027 500 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 500 - -
Gma14g01027 500 SUPERFAMILY ARM repeat 101 401 IPR016024 -
Gma14g01027 500 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01027 Gma-Chr14 12624050 12626531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01027 97 422 U-box Gene Family AT1G24330 28.736 3.11e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01027 - - gmx:100808483 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02078 17 37941037 37944181 Gma14g01027 14 12624050 12626531 GST
Gma14g01027 14 12624050 12626531 Gma04g00574 04 5187440 5189080 PCT
Gma14g01027 14 12624050 12626531 Gma06g00559 06 5007238 5008942 PCT
Gma04g00574 04 5187440 5189080 Gma14g01027 14 12624050 12626531 PCT
Gma06g00559 06 5007238 5008942 Gma14g01027 14 12624050 12626531 PCT