Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01005 ATGAGGGGATTCAAAGAAGAGTCCATAGTGGGGAAGGGAAGTTTTTCATGTGTGTTCAAAGGAGACCTCAAACATGGTACTATTGTTGCTGTTAAAAGGACCATAATGTCTCCCAACGTGCAGAAGAATTCCAAGGAGTTTCACACCGAGCTTGACTTGCTCAATCTACTAGGCTACTGTGAAGAAGGTGGAGAGAGGCTCGTTGTTTATGAGTGCATGGCTCATGGCTCTTTGCATCAACACCTACATGGCAACAAGGTGATGCAAGAGCAAATGGATTGGGTGACAAGGGTAACAATTGCAATGCAAGCAACTCACCAAATCGAATATTTGCATGGATATGTTTCTCCACCCGTGATTCACAAAGACATTAAGTCTTCAAACATCCTCATAGATGAAGAACACAATGTTAGAGTGGCTGATTTAAGTTTATCACTACTTGGTCTTACAGATATTCTGTCCAAGCACTCAACTGAACAGGTTTACCTTGGACAACGTGAGAACCCTAAATGGACTCTTGATGCTGAACCATTGGCAACATTTGAGAGGTTCTGGCAGAACCTGTTGGAGATTGAGAGACATATGATGGAAAGGAACACGAACAAGAGATTGAATAACAGAAATAGGCCAATGAACATGTCTCGATCCTTGTGA 654 0.4235 MRGFKEESIVGKGSFSCVFKGDLKHGTIVAVKRTIMSPNVQKNSKEFHTELDLLNLLGYCEEGGERLVVYECMAHGSLHQHLHGNKVMQEQMDWVTRVTIAMQATHQIEYLHGYVSPPVIHKDIKSSNILIDEEHNVRVADLSLSLLGLTDILSKHSTEQVYLGQRENPKWTLDAEPLATFERFWQNLLEIERHMMERNTNKRLNNRNRPMNMSRSL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01005 217 SMART serkin_6 4 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01005 217 SUPERFAMILY Protein kinase-like (PK-like) 3 155 IPR011009 -
Gma14g01005 217 Gene3D Phosphorylase Kinase; domain 1 1 72 - -
Gma14g01005 217 Pfam Protein tyrosine and serine/threonine kinase 7 146 IPR001245 GO:0004672|GO:0006468
Gma14g01005 217 ProSiteProfiles Protein kinase domain profile. 4 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01005 217 SUPERFAMILY Lipoxigenase 145 213 IPR036226 -
Gma14g01005 217 ProSitePatterns Protein kinases ATP-binding region signature. 10 32 IPR017441 GO:0005524
Gma14g01005 217 Pfam Lipoxygenase 144 214 IPR013819 GO:0016702|GO:0046872
Gma14g01005 217 Gene3D Transferase(Phosphotransferase) domain 1 73 172 - -
Gma14g01005 217 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 143 217 IPR013819 GO:0016702|GO:0046872
Gma14g01005 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gma14g01005 217 PANTHER RECEPTOR-LIKE KINASE 3 154 - -
Gma14g01005 217 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01005 Gma-Chr14 12112880 12113627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01005 3 151 Receptor kinase-like Gene Family AT3G59420 72.956 2.06e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma14g01005 PK_Tyr_Ser-Thr 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01005 - - gmx:100807392 252.292