Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00980 ATGGTGAAACCAGCCATGGCTAGTGTTGATTCTTCTTCCTTTTCTTCTTGTAAAAATGATTCATTTTCCTCTAACTACAGCATTGATACTTGCAAGATGTACAAAGGGGTAAGGAAGAGAAAATGGGGCAAATGGGTGTCCGAAATTCGGCTTCCCAACAGCCGTGAGCGCATATGGTTGGGGTCCTATGACACCCAAGTGAAGGCGGCCAGAGCATTTGATGTGGCACTTTATTGCCTACGTGGCAAAAGTGCGAGTTTCAACTTTCCTGACACACCTCGACACTTGGAAATTAATATGGTGTTACCATGTGACATACAACAACAACCTCTCTCCCATCCGGAGATTCAAGAGATAGCCTCGAAGTTTGCGAACAACGACCACGTCCCTTTGGAGGAGGAGAGTGCTTTTCAAGAACAAGAACAAGACCCCTCGATGGAGTCACAAAGTGACGAGTCTAAATCTGCCAATACAATAACGGAGATGAGCAACTTCCCTAATATTTATGATGGTGGAACTCATACTAATGTACAAGTGGATCAATTACAAGGGGATTGGGACAGCATGGATTGGACATTTTTTAACATGTTGGATGACTTGAATGGCTCGGATTTTGGCCTCTATTTGGGGCCAGACAAGTTGCACCCGGGTGATGATGATCATGATGCTTTTTCTAACCATTCCTTACTTTGGAGTTGGAACTTTTGA 708 0.4407 MVKPAMASVDSSSFSSCKNDSFSSNYSIDTCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQVKAARAFDVALYCLRGKSASFNFPDTPRHLEINMVLPCDIQQQPLSHPEIQEIASKFANNDHVPLEEESAFQEQEQDPSMESQSDESKSANTITEMSNFPNIYDGGTHTNVQVDQLQGDWDSMDWTFFNMLDDLNGSDFGLYLGPDKLHPGDDDHDAFSNHSLLWSWNF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00980 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 235 - -
Gma14g00980 235 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Gma14g00980 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF016 13 235 - -
Gma14g00980 235 MobiDBLite consensus disorder prediction 133 156 - -
Gma14g00980 235 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Gma14g00980 235 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Gma14g00980 235 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Gma14g00980 235 MobiDBLite consensus disorder prediction 141 156 - -
Gma14g00980 235 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Gma14g00980 235 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Gma14g00980 235 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Gma14g00980 235 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00980 Gma-Chr14 11544708 11545472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00980 34 170 AP2-EREBP Transcription Factor Family AT1G19210 51.034 2.19e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma14g00980 AP2 1.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00980 - - gmx:112999363 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00980 14 11544708 11545472 Gma14g00980 14 11544708 11545472 ECH
Gma14g00980 14 11544708 11545472 Gma17g02096 17 38314074 38314844 ECH
Gma17g02096 17 38314074 38314844 Gma14g00980 14 11544708 11545472 GST