Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00977 ATGCATTCTAGTTTACGTACACACACAATTTTAGTATATGAAGCACTTGGTTCCTTTGTGCTATGGTCGTTGGACAGCATTGTTGCAGACCTTGCCAGTCATCAAGGAGTTGTTAAGGGATATAAGAAGGCAGTCCAACAATCATCATCGAAATCTCAGATTGTTGAACTATTCACAGCACACTATGTTTTTGCTCATGGAGTTGCAAGGTTCTTGAGTTGTGCATATTGGGTCCTCCAGGTGTTTTCTTTTGATGTTGCGGATTTTGATGGTGGAGAAATTCGGGCAACTTGCTTCAATGCTGTGGCTGATCAGTTCTACAATGTTATTGAAGCTGGTAAAGTATATCTAATTTCCAAGGGAAGCATAAAGCCAGCTCAGAAGAATTTTAATCACCTTCACAATGATCAAGAGCTGACCCTTGATGTGGCATCAATTATACAACCATTCCTTGATGATAATGACTCAATTACATCACAGACATTTAATTATCACCCATTAGTGAAATTGAAAGTTTGGAAAACAACAGCATTGTGGATgtga 543 0.3849 MHSSLRTHTILVYEALGSFVLWSLDSIVADLASHQGVVKGYKKAVQQSSSKSQIVELFTAHYVFAHGVARFLSCAYWVLQVFSFDVADFDGGEIRATCFNAVADQFYNVIEAGKVYLISKGSIKPAQKNFNHLHNDQELTLDVASIIQPFLDDNDSITSQTFNYHPLVKLKVWKTTALWM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00977 180 Gene3D - 77 153 IPR012340 -
Gma14g00977 180 Coils Coil 180 180 - -
Gma14g00977 180 CDD RPA1_DBD_A 80 149 - -
Gma14g00977 180 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 80 170 - -
Gma14g00977 180 PANTHER REPLICATION FACTOR A 1, RFA1 80 170 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma14g00977 180 SUPERFAMILY Nucleic acid-binding proteins 80 156 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00977 Gma-Chr14 11504285 11506597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00977 80 167 Core DNA Replication Machinery Family AT2G06510 59.091 2.54e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00977 K07466 - gmx:100778597 161.77