Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00975 ATGGTAATACCTATGGGTGATATTCTTGAGGTGCGATTAATGAAAGACAGGGGCACCGGAGAACACAAGGATTATGCCTTTGTGGCTTTTAAAACAAAACAGGTAACTCAAAAGGCTATTGAGGAGATACGTAGCAAGGAATCTAAGAATAATAAGGTTGTCAATGAGATACATGGGTCTTCTACTAAGAAGAACAAAGAGTACCAAGAGAAGCTACACGTTGTTGTGCTCAGGGCAGAGGAAATTATTTTCTCTAAAGCCAATTTCGAGGTGTGTAAGAAGCTTGGTGAAGAGGGAGCAAGGGATATTTATACTGGAGAGATCTTGTCATTTTCCCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCGAATGTCACCATACGCCAACCCGGTTCTTCTGGTGGCATATTGACATATGAGGCATGTTGCAGACAACAGTGGCATGAAAAGCCGAACCGGTGGATTGAATGTACGTCTCACTTGCATGGTCCTGATGGTCAGGTGATTGGTGGTGGTGTTGCTGGACTTTTAACTGCTTCAGGCCCCATCCAGTCTGGTTCATACGCGCCTTCTAATCCAGCCAACCCATATGGCATTGGACTATATGGACATGGAGAGGGAATTGCTATTGGCCCCTAA 657 0.4475 MVIPMGDILEVRLMKDRGTGEHKDYAFVAFKTKQVTQKAIEEIRSKESKNNKVVNEIHGSSTKKNKEYQEKLHVVVLRAEEIIFSKANFEVCKKLGEEGARDIYTGEILSFSQKGPRGICILSANGAISNVTIRQPGSSGGILTYEACCRQQWHEKPNRWIECTSHLHGPDGQVIGGGVAGLLTASGPIQSGSYAPSNPANPYGIGLYGHGEGIAIGP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00975 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 54 IPR000504 GO:0003723
Gma14g00975 218 Gene3D - 101 191 - -
Gma14g00975 218 ProSiteProfiles PPC domain profile profile. 87 218 IPR005175 -
Gma14g00975 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 106 147 IPR039605 GO:0003680
Gma14g00975 218 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 167 196 - -
Gma14g00975 218 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 189 IPR005175 -
Gma14g00975 218 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 106 147 - -
Gma14g00975 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 167 196 IPR039605 GO:0003680
Gma14g00975 218 Gene3D - 1 78 IPR012677 -
Gma14g00975 218 SUPERFAMILY RNA-binding domain, RBD 5 63 IPR035979 GO:0003676
Gma14g00975 218 CDD DUF296 107 186 IPR005175 -
Gma14g00975 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 53 IPR000504 GO:0003723
Gma14g00975 218 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00975 Gma-Chr14 11464685 11469406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00975 105 190 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 51.042 3.46e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00975 - - gsj:114387807 107.842