Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00962 ATGAGCGGAAAAGCCTCCGTCTCCAAGGAGCTCCATGCCAAGCACACCAAGATATTAGAGGGACTTGTTAAGCTACCTGACAACAGGGAATGTGCAGACTGCAGGACCAAGGCACCACGATGGGCAAGTGTGAACTTAGGGATATTCATTTGCATGCAATGTTCAGGAATTCACCGTAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTTATGCAATTAATTGGTAATGCAAAGTCAAATAAGCACTGGGAGGCAGAATTACCGCCAAATTTTGACAGAAATGGATATGGAGTTGAGAAATTTATTCGTTCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGGACTACAGCCAGCTTCAAAGTCAGCTGAAATAATCTTTAACTCGAATGAATCACCAGCTGCTGGGGCCAAGAGTGCCACTCAGAGGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTTGTGAAACATGTGGCACAAATTCGGCCTCCAGTCACGAGATATCATGAGGTTCTTGGTCTTTTAGGTGGAAACCAACTAAACAGTGTTATTAACTCAGAGAAAGCTGTGAAGATGGATAGTGCTGCTGTTGCTGAGTTACTTGACTTGATAGACACTGGTGATTTGAATGACTCCTCATGGAACAGAGTAGCTAGTGAATCACTAAAAAATGATGATCCCTTTGCTGATGTGTCATTTCATTCTAATGACAACAAAGAGCATGCTGATATCTTTTCAAGCATGACTGTTGTTGATGATAAATTGGATCATCATGTGCAAAGATGTGCTGAAGACATGTCCATATTGATTACCACCTATGAAGGAACTCACAATCACCCTGTTCCTATGTCAGCCACTGCAATGGCCTGCAAAACTTCTGCTACAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGATTAGTTGATTCAGCTATATCCTCCATCATCAACTCTAGTGCTCGTTATTACAACCCTAATAATGCTCTAAACTTCTCTACACACCAAGTTTCAAGACCGCAACAATTCTACTTCCCCAACTCATCCATTTCAACCTTGAATTCTCACCCCACAATCACTTTAGACCTTACAACACCTCCAACTTCTTCCTCAAACTCAAGCTTCACTTGCATGCCAAAATACTCATCAACAAACCTTAACTTTTCCTCAGGTTTCTCTCCTCTACATTCTCAGCATTCTTTCCCTAATCCCATTGTTGCTGCAACTGAGGCAATAATCAGAAGCAACCCAAAATTTCAATCAGCACTAGCAACTGCTCTCACAACATATGTTGGCAATATAGCTAGTAGTGGTAGGACAAGAGAAAATCATGTTCTTGAGAGTGCAGAACTAATGAAGTTAAAGCTGCTACGTAGTGAAAATAGTATAGGAAACTCAAGTATATTTCCACTACCACTATCGGAGCAAAGGAACAGGTTTTGA 1491 0.4158 MSGKASVSKELHAKHTKILEGLVKLPDNRECADCRTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLIGNAKSNKHWEAELPPNFDRNGYGVEKFIRSKYVEKRWASKGGLQPASKSAEIIFNSNESPAAGAKSATQRNRRLSLEESILVKHVAQIRPPVTRYHEVLGLLGGNQLNSVINSEKAVKMDSAAVAELLDLIDTGDLNDSSWNRVASESLKNDDPFADVSFHSNDNKEHADIFSSMTVVDDKLDHHVQRCAEDMSILITTYEGTHNHPVPMSATAMACKTSATASMLQSPSLSSQHGLVDSAISSIINSSARYYNPNNALNFSTHQVSRPQQFYFPNSSISTLNSHPTITLDLTTPPTSSSNSSFTCMPKYSSTNLNFSSGFSPLHSQHSFPNPIVAATEAIIRSNPKFQSALATALTTYVGNIASSGRTRENHVLESAELMKLKLLRSENSIGNSSIFPLPLSEQRNRF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00962 496 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Gma14g00962 496 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 340 IPR044520 GO:0005096
Gma14g00962 496 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Gma14g00962 496 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Gma14g00962 496 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Gma14g00962 496 SMART arf_gap_3 5 132 IPR001164 GO:0005096
Gma14g00962 496 ProSiteProfiles WRKY domain profile. 272 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma14g00962 496 CDD ArfGap 19 119 - -
Gma14g00962 496 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Gma14g00962 496 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
Gma14g00962 496 Gene3D WRKY domain 262 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma14g00962 496 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 340 - -
Gma14g00962 496 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00962 Gma-Chr14 11221467 11228241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00962 19 119 C2H2 Transcription Factor Family AT4G05330 49.533 3.18e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00962 K12486 - gmx:100816853 377.867