Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00902 ATGGAGGCAGGTTACAATCCTCGTACCGTCGAAGAGGTCTTTAGGGATTTCAAGGGTCGCAGAGCTGCTTTGATTAAAGCCCTCACCACCGATGTTGAAGAGTTCTACCAGCAGTGCGATCCCGAGAAGGAAAATCTTTGCCTTTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATCTGCCAGCTGAGGAGGTGCCCCCTGAGCTTCCAGAGCCAGCATTGGGCATTAACTTTGCCAGAGACGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGCTTGGTTGCTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGACAAGGCTGATAGGAAGCGACTATTTAATATGATAAATGATCTTCCGACAATATTTGAGGTTGTTACAGGGATGGCCAAGAAACAAGGAAAGGAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCTAAGTCAAACTCTAAGCGAGGTTCTGAATCAAAGTATACAAAAGCAATGCAATCAAAGGACGAGGATGATGAGGGTGGTGCGGGTTTGGGTTTGGAAGACGAAGAGGAAGAGGAACATGGAGATACCTTGTGTGGGGCATGTGGAGAGAGCTATGCTGCTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAATGGTTCCATGGAAAGTGCGTGAAGATTACCCCTGCAAGGGCTGAGCATATCAAGCAGTACAAATGTCCTTCTTGCAGCAACAAGCGAGCTCGACCTTGA 765 0.4667 MEAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSTKSKSNSKRGSESKYTKAMQSKDEDDEGGAGLGLEDEEEEEHGDTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00902 254 MobiDBLite consensus disorder prediction 143 184 - -
Gma14g00902 254 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 4 254 - -
Gma14g00902 254 PANTHER CPG BINDING PROTEIN 4 254 IPR045104 GO:0006355|GO:0042393
Gma14g00902 254 SUPERFAMILY FYVE/PHD zinc finger 190 251 IPR011011 -
Gma14g00902 254 CDD PHD_AL_plant 200 250 IPR044104 -
Gma14g00902 254 SMART PHD_3 200 248 IPR001965 -
Gma14g00902 254 Pfam Alfin 9 137 IPR021998 GO:0006355|GO:0042393
Gma14g00902 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 249 IPR013083 -
Gma14g00902 254 MobiDBLite consensus disorder prediction 159 182 - -
Gma14g00902 254 ProSitePatterns Zinc finger PHD-type signature. 201 247 IPR019786 -
Gma14g00902 254 ProSiteProfiles Zinc finger PHD-type profile. 198 250 IPR019787 -
Gma14g00902 254 Pfam PHD-finger 201 250 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00902 Gma-Chr14 10143792 10149051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00902 1 253 Alfin-like Transcription Factor Family AT3G42790 75.875 6.59e-128 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Gma14g00902 Alfin 1.6e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00902 - - gmx:100797908 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00902 14 10143792 10149051 Gma14g00902 14 10143792 10149051 ECH
Gma14g00902 14 10143792 10149051 Gma17g02149 17 38998822 39003831 ECH
Gma17g00486 17 3998308 4002516 Gma14g00902 14 10143792 10149051 ECH
Gma17g02149 17 38998822 39003831 Gma14g00902 14 10143792 10149051 GST