Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00900 atgctaaaagtgtttattgttataggggatggtggtgaattttatcatgaattaatagaccatggttaccctgatggaaatgaaaaggctttatggacagaggtgctggaatcatATCTCAGGAAAAAGATGAAGAGACAGGCTGCTTTTTGTCCAAGAAAGAGCAAGGGATTACTGATTTCCTTGAACCCTATTCTCACTTGTGGAGTCAATATAAATTTCTGTGACATCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGGTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAAATGCACAAGATCCAATTGGTAAAACTGCTGCATCTATTGCAGTCGGCAGTGGGCACAAGGGATTGGCAGGGTATCTTTCAGAGATAGCTGTAACAAGTCATCTGTCATCTCTTACACTGGAAGAAAGTGAATTATCTAAAAGTTTTGTTGAGCTTCAGGCAGATATAACTGTTAACAGTGTCTCCAAGGAAAATCTTACTGCCAGTGAGGATCAGGCATCACTCAAAGATACCTTGGCTGCTATCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATTTGCTTTTCGTTCACATTCTTTTAGAAAACGAAGAGCAAGAGAAGCAGCTGCTAATGCAGGTGGCATTGGTACCATTTCAGAGATTTCTGCTATGTTAAAACTTGCCTTTCGGAACTCACGTGAATATAATTCAGCTGCTTTATCGATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCGTTGCGCAAAAAAGTAGTGAAGCTACAAGCTCATGTGAGGGGCTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATCTTGGACAAGGTTGTCTTACGATGGAGGAGAAAAGGAGCTGGTTTACGAGGTTTCCGATAA 954 0.3753 MLKVFIVIGDGGEFYHELIDHGYPDGNEKALWTEVLESYLRKKMKRQAAFCPRKSKGLLISLNPILTCGVNINFCDINGWTALHWAARFGREKMVASLIGSGASAGAVTDPNAQDPIGKTAASIAVGSGHKGLAGYLSEIAVTSHLSSLTLEESELSKSFVELQADITVNSVSKENLTASEDQASLKDTLAAIRNVTQAAARIQFAFRSHSFRKRRAREAAANAGGIGTISEISAMLKLAFRNSREYNSAALSIQKKYRGWKGRKDFLALRKKVVKLQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00900 317 SMART iq_5 269 291 IPR000048 GO:0005515
Gma14g00900 317 SMART iq_5 246 268 IPR000048 GO:0005515
Gma14g00900 317 SMART ANK_2a 117 146 IPR002110 GO:0005515
Gma14g00900 317 SMART ANK_2a 78 107 IPR002110 GO:0005515
Gma14g00900 317 Pfam Ankyrin repeats (many copies) 80 137 IPR002110 GO:0005515
Gma14g00900 317 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 61 317 - -
Gma14g00900 317 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Gma14g00900 317 ProSiteProfiles IQ motif profile. 247 276 IPR000048 GO:0005515
Gma14g00900 317 Pfam IQ calmodulin-binding motif 249 267 IPR000048 GO:0005515
Gma14g00900 317 Pfam IQ calmodulin-binding motif 271 291 IPR000048 GO:0005515
Gma14g00900 317 SUPERFAMILY Ankyrin repeat 63 139 IPR036770 -
Gma14g00900 317 Gene3D - 41 148 IPR036770 -
Gma14g00900 317 ProSiteProfiles IQ motif profile. 197 225 IPR000048 GO:0005515
Gma14g00900 317 Gene3D - 246 295 - -
Gma14g00900 317 ProSiteProfiles IQ motif profile. 270 295 IPR000048 GO:0005515
Gma14g00900 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 293 IPR027417 -
Gma14g00900 317 ProSiteProfiles Ankyrin repeat region circular profile. 78 104 - -
Gma14g00900 317 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 61 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00900 Gma-Chr14 10099523 10101627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00900 64 317 CAMTA Transcription Factor Family AT1G67310 69.349 1.03e-101 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00900 K21596 - gmx:100786880 442.195