Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00880 ATGGGTGCATCTGGAAAATGGGTAAAAGCATTAATCGGACTCAACAACAAGAACGACCTCGGTGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGATTTCTTCTGCAGGGGAAAACAGATCTCAAGACTACGACTACGCTAGCGTGGCTTCGGATTCTTTCAATGCTGCGGTGGCCACTGTGGTCAGAGCTCCGCCCAAGGATTTCAAACTACTCAAGCAAGAATGGGCCGCCACCCGAATCCAAACCGCTTTCCGCGCCTTCTTGGCAAGAAGGGCACTGAGGGCATTGAAGGGAGTGGTGAGACTTCAAGCTCTTGTACGAGGTAGACTCGTGAGGAAGCAGGCTGCGGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCTCGTGTAAGAGCTCGGCGCGTGCGAATGTCTATTGAGGGCCAAGCAGTGCAGAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCATCAAACAAGCTGAGGAAGGCTGGTGTGATAGCAAAGGATCATTGGAAGATGTCAAGACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCACAAGCAATGGAGATCAACCCCCATCTCTAATTCAAGAGCAAATGCCACTCTCAACAATCAGGATACGGACAAGGCAAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCATGGGAGAGTAGATTAATGGAACAAACCCATCATGCTAATGCCACAGAGAAGACCCCTCCTCCTCCGCCAAAGAAATGTGTTGACTCCTCAAATTCAAAAACATCAGAACCATGCAATGTCAAAATCAGAAAGAACAATGTCAGCACAAGGATCTCTGCTAGACCTCCCCTTATTTGGCAAGCTAATCATTTGTCCTCAAGTCCAAGTTCCGAGTTTCACTATGATGAGAGCTCTAATTCATCCTCAATATGCACTTCTACAACGCCAATATCTGGGAGTGCTGCATTGCCCTGTGACAGGACAGAGGATACTAACAACACAAGGCCTAGTTACATGAACCTCACCGAGTCAACCAAGGCGAAGCAGAAAACCAACAACCATCAATACAATAGATCTCATAGGCAGCAGTCCATGGATGAGTTCCAGTTTCTCAAAAGAACAGCGGTTTTCTCTAATGGTGCTTCTGACCCTTCAACCAACTTCTGTAGGCCTCTTTACCTACCAACCTACATGGATAAGAGGTCACAGTGA 1254 0.4817 MGASGKWVKALIGLNNKNDLGGKKKKWRLWKISSAGENRSQDYDYASVASDSFNAAVATVVRAPPKDFKLLKQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELIKQAEEGWCDSKGSLEDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRANATLNNQDTDKANWGWSWLERWMAAKPWESRLMEQTHHANATEKTPPPPPKKCVDSSNSKTSEPCNVKIRKNNVSTRISARPPLIWQANHLSSSPSSEFHYDESSNSSSICTSTTPISGSAALPCDRTEDTNNTRPSYMNLTESTKAKQKTNNHQYNRSHRQQSMDEFQFLKRTAVFSNGASDPSTNFCRPLYLPTYMDKRSQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00880 417 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Gma14g00880 417 PANTHER IQ-DOMAIN 5-RELATED 1 416 - -
Gma14g00880 417 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Gma14g00880 417 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Gma14g00880 417 SMART iq_5 72 94 IPR000048 GO:0005515
Gma14g00880 417 SMART iq_5 95 116 IPR000048 GO:0005515
Gma14g00880 417 MobiDBLite consensus disorder prediction 336 373 - -
Gma14g00880 417 MobiDBLite consensus disorder prediction 250 278 - -
Gma14g00880 417 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Gma14g00880 417 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00880 Gma-Chr14 9553099 9555653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00880 1 414 IQD Protein Family AT2G26180 58.161 1.06e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00880 - - gmx:100787102 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00880 14 9553099 9555653 Gma14g00880 14 9553099 9555653 ECH
Gma17g02176 17 39400123 39402777 Gma14g00880 14 9553099 9555653 GST
Gma14g00880 14 9553099 9555653 Gma04g00483 04 4306130 4308544 PCT
Gma14g00880 14 9553099 9555653 Gma06g00475 06 4055860 4057924 PCT
Gma04g00483 04 4306130 4308544 Gma14g00880 14 9553099 9555653 PCT
Gma06g00475 06 4055860 4057924 Gma14g00880 14 9553099 9555653 PCT