Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00877 ATGGAGAGAATTAGAGTGAAGGAGGAAGAAGCAGTGACATGTGGTGGTGGTTCATCATCATCATCATCTTCGTCTTCAAGCTTTTCTCCACAGCCTATGGAAGGGTTGCACGAGGTGGGTCCCCCTCCGTTTCTGAGCAAGATCTTTGACATGGTAGAAGATTCTTCCACGGACTCCATTGTGTCATGGAGCATGGCTCGCAACAGCTTTGTGGTGTGGGATTCTCACAAGTTTTCTGCTGACATTCTGCCTCGTTACTTCAAGCACGGCAATTTCTCCAGCTTCATTCGCCAGCTCAACGCCTATGGGTTTAGGAAAGTTGATCCTGATAGATGGGAATTTGCAAACGAAGGTTTTTTGGCAGGACAAAGGCACTTATTGAAGACCATTAAGAGAAGAAGAAATGTGTCACAGAGTTTGCAACAAAAAGGAGGAAGTGGAGCTTGTGTTGAAGTGGGGGAGTTTGGACTCGAAGGTGAGTTGGAGAGGTTGAAAAGAGACAGGAACATTTTGATGGCAGAAATTGTGAGATTGAGGCACCAACAACTGAACTCAAGGGAACAATTGAATTCCATGGAGACCAGATTGCAAGCCACTGAGAAGAAACAGCAGCAAATGATGAGTTTCCTTGCAAAAGCACTGAGTAACCCATCTTTCACGAAACAATTAGTCCAAAAGACCCCCCAAAGCAGAGAAGTGTTGGGTGTTGAAATCAATAGGAAAAGGAGACTGACTGCTAGTCCAAGTGTTGAGAACTTGCAACAAGATGATCAAGATTTGGCAACTTTGGATTATCCAAGCCATGATCGAGATTTGGCAACTATGGAGACTGATATGGACACTTTTTTCTCACCGGCTTATGATAATGAACTTAGCAGTGAAACCAATGAGCCTGCATCAATTTCGGTTGAGGATACAATCTTGGAGGACTTTCTCAACAAAGACTTGGTTACTTGGAATCCGGAGGATGAAGTTATAATTGGGGATAGTTCCCAAGTCGATGTGCCGGTGGAGGATTTGGTTGCAAACCCTGATGATTGGAGTGAGCAATTGCAGGACCTTGTGGATCATATGGACTATCTAGGCTAA 1089 0.4444 MERIRVKEEEAVTCGGGSSSSSSSSSSFSPQPMEGLHEVGPPPFLSKIFDMVEDSSTDSIVSWSMARNSFVVWDSHKFSADILPRYFKHGNFSSFIRQLNAYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRRNVSQSLQQKGGSGACVEVGEFGLEGELERLKRDRNILMAEIVRLRHQQLNSREQLNSMETRLQATEKKQQQMMSFLAKALSNPSFTKQLVQKTPQSREVLGVEINRKRRLTASPSVENLQQDDQDLATLDYPSHDRDLATMETDMDTFFSPAYDNELSSETNEPASISVEDTILEDFLNKDLVTWNPEDEVIIGDSSQVDVPVEDLVANPDDWSEQLQDLVDHMDYLG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00877 362 MobiDBLite consensus disorder prediction 1 35 - -
Gma14g00877 362 PRINTS Heat shock factor (HSF) domain signature 44 67 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 PRINTS Heat shock factor (HSF) domain signature 95 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 SMART hsfneu3 40 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 18 282 - -
Gma14g00877 362 Pfam HSF-type DNA-binding 44 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 MobiDBLite consensus disorder prediction 14 32 - -
Gma14g00877 362 SUPERFAMILY "Winged helix" DNA-binding domain 40 133 IPR036390 -
Gma14g00877 362 ProSitePatterns HSF-type DNA-binding domain signature. 83 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma14g00877 362 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 282 IPR027725 -
Gma14g00877 362 Coils Coil 161 202 - -
Gma14g00877 362 Gene3D - 37 134 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00877 Gma-Chr14 9531460 9534352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00877 30 362 HSF AT2G26150 52.522 9.15e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma14g00877 HSF_DNA-bind 2.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00877 K09419 - gmx:100778558 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00877 14 9531460 9534352 Gma14g00877 14 9531460 9534352 ECH
Gma17g02178 17 39429823 39432794 Gma14g00877 14 9531460 9534352 GST
Gma14g00877 14 9531460 9534352 Gma04g00481 04 4285701 4287612 PCT
Gma04g00481 04 4285701 4287612 Gma14g00877 14 9531460 9534352 PCT