Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00870 ATGTCCAATTTGACGTCTGCATCCAGTGAAATAAGTGCTTCTTCAGGAATCAGGAATGACAACGGTTCTTCTCTCTATGCTCAATATTCCTCTACTTCAATAAGTCAAGAACCACAACCTAAAAAGAAGCGAAGTCTTCCAGGTCACCCAGACCCTGAGGCAGAAGTGATAGCATTGACTCCGCGGACCCTTTTGGCAACAAACAGGTTCGTTTGTGAGATATGTCACAAAGGGTTTCAGAGAGACCAGAACTTGCAGCTTCATAGAAGAGGGCACAATTTGCCATGGAAGCTGAAGAAAAAGAGCAGCAAAGACGACGTGAGAAAGAAAGTGTATGTGTGCCCAGAGGCAACATGCGTTCACCATGACCCTTCAAGGGCCCTTGGGGACCTCACTGGAATCAAGAAGCACTTTTTCAGGAAACACGGAGAGAAGAAATGGAGGTGTGAGAAGTGCTCCAAACTCTACGCGGTTCAATCAGATTGGAAAGCCCACTCCAAAATCTGTGGCACCAAAGAATATAAATGCGACTGTGGTACCCTTTTCTCTAGGAGGGACAGCTTTATCACTCACAGAGCCTTCTGTGATGCCTTAGCACAGGAAAGTAGTAGAGTAGTGAACCCTCACCCTCTTCTATCAACTCAATTTCGTAGTCATGGCCTTCAGCTTCAAGCACCATCACTTCTGAAAAGAGAACATGATCACTTCAACTTATTAACCTCAGAAATTCCATCATGGTTAACTTCTCCAACAGTGGTAGAAGAAGCAATATTGCTAAACAATCAAACCATAAGAACCACCTCAGATTACTTCTCCAAACCACAGTTATTCCCAACAGCACATGTCAACAATAACCACTCCTTACTCCATGATCAAAACCCTAACCCTAATACTACTACAACAACCACTTTTCTTTCTTCTTTGAGTTCCTTCCCTAATTATTCCACTTCTTCTTCTTCTTCTCCTCACATGTCAGCGGCTTTGTTGCAAAAAGCCTCACAAATAGGCGAAACAGTGAGCAGTGCACCTTCACAAGCGATGCTGGTTAGACCCCACTTGTTACTGCAGCAGCAGGTTCACGTGCCCGAATGTACAACAACAACAGCAATTGCAACAACAGGGTATAATATCAATATGGCTGCATCTTCAGCCGTTTCTGGAATGGTTATTATGCCTTCACGTGAAGAAATAGGGGCTCTTGGGTTTGCTAGTGGCATGGCATCTTGA 1227 0.4425 MSNLTSASSEISASSGIRNDNGSSLYAQYSSTSISQEPQPKKKRSLPGHPDPEAEVIALTPRTLLATNRFVCEICHKGFQRDQNLQLHRRGHNLPWKLKKKSSKDDVRKKVYVCPEATCVHHDPSRALGDLTGIKKHFFRKHGEKKWRCEKCSKLYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAQESSRVVNPHPLLSTQFRSHGLQLQAPSLLKREHDHFNLLTSEIPSWLTSPTVVEEAILLNNQTIRTTSDYFSKPQLFPTAHVNNNHSLLHDQNPNPNTTTTTTFLSSLSSFPNYSTSSSSSPHMSAALLQKASQIGETVSSAPSQAMLVRPHLLLQQQVHVPECTTTTAIATTGYNINMAASSAVSGMVIMPSREEIGALGFASGMAS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00870 408 MobiDBLite consensus disorder prediction 1 40 - -
Gma14g00870 408 Gene3D Classic Zinc Finger 70 110 - -
Gma14g00870 408 SMART c2h2final6 70 92 IPR013087 -
Gma14g00870 408 SMART c2h2final6 147 167 IPR013087 -
Gma14g00870 408 SMART c2h2final6 112 142 IPR013087 -
Gma14g00870 408 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 3 367 - -
Gma14g00870 408 SUPERFAMILY beta-beta-alpha zinc fingers 69 167 IPR036236 -
Gma14g00870 408 MobiDBLite consensus disorder prediction 1 53 - -
Gma14g00870 408 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Gma14g00870 408 Gene3D Classic Zinc Finger 111 195 - -
Gma14g00870 408 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 3 367 - -
Gma14g00870 408 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00870 Gma-Chr14 9359388 9364477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00870 1 212 IDZ Gene Family AT1G55110 72.897 5.18e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g00870 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00870 K25870 - gmx:100783557 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02182 17 39485015 39488829 Gma14g00870 14 9359388 9364477 GST