Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00860 ATGACTCCTTATTCTCTGAACCCACCAGGCCCTTCCATACAAGCTGGTCAAAACCAACTCTTCAATATTTCTCCTAATAATCAGGACTGCCGTACCTTTTTTAACATATTTGATCCAAGGCAAACCAGCATAGAAATTGGAGGGTTAAGAGAAAATTATCGACAGGATGACAAGATGATATTGCATGATGGATCATCAAGCAACTGCAACTCGTCCTTCAATATTTCACCTGAGACAGTAGTTATGGTTGATCCATTAAGCAGCGCATGTGATCGGCGTAATTTACCATCTGAGGAAGAGAGCAAAAATAACGATCACGGGTCTGGGAACAAATGGATGTCTTCAAAGATGAGGTTAATGAAAAAAATGATGAGACCGAGTATCAGTCCAACCACTGACAAAGCAATCAATTCAAGCCCAAGATTCCAAAATCATCAAGGGCTCGAAAGCAGAAGGTACAGCCAAAGAAGCCCTCGTAACAACAACGGCAGTAGCACCCCTAGGGTTTGTTCGGATTGCAATACAAGCACTACCCCACTTTGGAGGACTGGCCCTAAGGGTCCCAAGTCTCTTTGCAATGCCTGTGGCATTAGACAGAGGAAGGCAAGAAGGGCAATGGCGGAAGCTGCAAATGGTTTGGTCACTCCCATAGCATGTGAAAAGACCAGACTACACAACAAGGAAAAGAAGTCTCGTATGAACCATTTTGCACAGTTCAAGAACAAGTACAAGTCCACTACTACTACTACTACTACTACTGTAGGCTCATCTGAGGGAGTGAGGAAGCTTGAATATTTCAACAACTTCGCCATAAGTTTGAGGAGTAACAACTCTGATTTTGAACAAATGTTTCCACGGGATGAAGTAGCTGAGGCGGCATTGCTTCTGATGGACTTATCTTGTGGTTTTGTCCACTTATAA 921 0.4321 MTPYSLNPPGPSIQAGQNQLFNISPNNQDCRTFFNIFDPRQTSIEIGGLRENYRQDDKMILHDGSSSNCNSSFNISPETVVMVDPLSSACDRRNLPSEEESKNNDHGSGNKWMSSKMRLMKKMMRPSISPTTDKAINSSPRFQNHQGLESRRYSQRSPRNNNGSSTPRVCSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKARRAMAEAANGLVTPIACEKTRLHNKEKKSRMNHFAQFKNKYKSTTTTTTTTVGSSEGVRKLEYFNNFAISLRSNNSDFEQMFPRDEVAEAALLLMDLSCGFVHL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00860 306 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 27 305 - -
Gma14g00860 306 SMART GATA_3 164 215 IPR000679 GO:0006355|GO:0043565
Gma14g00860 306 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 27 305 - -
Gma14g00860 306 MobiDBLite consensus disorder prediction 130 183 - -
Gma14g00860 306 ProSitePatterns GATA-type zinc finger domain. 170 195 IPR000679 GO:0006355|GO:0043565
Gma14g00860 306 Gene3D - 160 234 IPR013088 GO:0006355|GO:0008270
Gma14g00860 306 ProSiteProfiles GATA-type zinc finger domain profile. 164 200 IPR000679 GO:0006355|GO:0043565
Gma14g00860 306 CDD ZnF_GATA 169 206 IPR000679 GO:0006355|GO:0043565
Gma14g00860 306 Pfam GATA zinc finger 170 203 IPR000679 GO:0006355|GO:0043565
Gma14g00860 306 MobiDBLite consensus disorder prediction 91 112 - -
Gma14g00860 306 MobiDBLite consensus disorder prediction 127 191 - -
Gma14g00860 306 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 165 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00860 Gma-Chr14 9234483 9237513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00860 111 305 C2C2-Gata Transcription Factor Family AT4G26150 38.426 1.06e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma14g00860 GATA 1.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00860 - - gmx:100780326 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00860 14 9234483 9237513 Gma14g00860 14 9234483 9237513 ECH
Gma17g02188 17 39559592 39562353 Gma14g00860 14 9234483 9237513 GST
Gma14g00860 14 9234483 9237513 Gma04g00475 04 4229132 4236804 PCT
Gma04g00475 04 4229132 4236804 Gma14g00860 14 9234483 9237513 PCT