Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00685 ATGGGTTGTGACTGTGGGGGAAAGTTAAATGTGAGAAAGCCTCATTTCTATGAGGTTTATTCTTCTGCCTTCAGCTCTCACAGACTGAGACTTCCCGATGGATTTGTCTGTTGTATGGAGGGAAGGGCATATGGATCAGTTTCGTTGACTGGTCCTAGTGGAAACATATGGACTGTGCAATTGATTAAGCAAGACAATGATCTATTTTTCCATCATGGATGGTCGACATTTGTGGTGGATCATCGACTAGAATGTGGTGAACTTTTGGTTTTCAGATATGAGGGTCACTTGCATTTTACCGTGCAAATATTTGATAAGGATGCATGTGAGAAAGAGGCAGCGTTTCATTCTGAATGCAGTCAAAGTTCAAGCGACTTTGATAATATTAAAGGGCAGAAAAGAGATCGAAAGGAGAATTCTTCTTTGCATATTGTTGTTGATGGTGTTCCAAAGAAAATGAGAGGCAGTACCAATGAGAACCAGGAACTTGAACTGGGTGTTGGTAAAGAACTACTGCTGTATGACGTTGTAAGACCAATTAGTATGTTCAGAGAAAATGAAGAAACCTCCAAAACATGTTCAGCTAATGATGTCCCTGTGCCTTTTCACATGGAAAATAGCAATGAAGATGAAGAGGCTGACATCCTGTATAGAAGTGGGAACGACGATCATCATTATATTCTCAGTGGAGTTTCATTATCAAATGTATCAGCACACGATGAGAAAAAAGTTGCCCAGTCATTTATTTCCTCTTTTCCATATTTTGTTAGAATCATGAAAAGCTTCAATGTCAGTGGTTCATATACTCTGAATATCCCATATCAGTTTTCGATGGCACATCTTCCCAATTGCAAGATAAAGATTATTCTTCATAATTTGAAAGGAGAACATTGGACTGTTAATTCTGTGCCAACAACTAGGGTGCATACTAGTCATACTCTTTGTGGAGGATGGATGGCCTTTATTCGTGGTAATAACATAAAGGTTGGAGATATCTGTATTTTTGAGCTTGTGCGTGAGTGTGAATTACGTGTTCGCATTGCTGAGGTGGGAAAAGATGGGCGAGATTGCCAGGTTGGAAACGTAGCCATGACTAGGCCTAGTGCAGGACATGCTGTAAGTTCCAAATGTATGTCAATGAATCCTAAAGTCAACTCGAAATGCATAAGAAAAGTTGATCTATCAGATAAGAAGTGGTCAAAGATTGGTCAAGAAACTATTTTATCCATTGACTTAAAGAAATCTAGTAGAGCTTCAAATACTTCTAAGAAGATGGGGCTTTGCCCTCAGTCGAAAGCTGCCCATAAAAAGTTGGCTGCTCCAAGGAGACATCGTGTTGAAGATGAGCTAAGCTCACAGGCTAAAGCTGGTTTGAGAATGTTGTTTGCACTTGATGAACAAAGAGTAGCTCAAGCTTTTAGTTCCCCTTTTCCTAGTTTTGTGAAAATAATGAAAAAGTTTAATGTCAGTGGATCATACACTTTGAAAATTCCATACCAGTTCTCAGCTGCACATCTCCCAACTTACAAAACTGAAGTTACACTTCGTAATTCAAGAGGTGGATGTTGGACTGTGAACTCGGTCCCAGATGCAAAAGGCCGAACAGTTCACACCTTTTGTGGGGGATGGATGGCCTTTGTTCGTGACAATGACATCAATTTTGGAGACACATGCATTTTTGAACTTGTTGCTCAGTGTGAGATGCAGGTTTACATATCTGGGGTTGGAAAGGAAGGGCTTGACCATCAAAATGGCCATTTAAAACTTACTAATAGATTAGCTAACGTTCCATCTACCTGCTAA 1803 0.3988 MGCDCGGKLNVRKPHFYEVYSSAFSSHRLRLPDGFVCCMEGRAYGSVSLTGPSGNIWTVQLIKQDNDLFFHHGWSTFVVDHRLECGELLVFRYEGHLHFTVQIFDKDACEKEAAFHSECSQSSSDFDNIKGQKRDRKENSSLHIVVDGVPKKMRGSTNENQELELGVGKELLLYDVVRPISMFRENEETSKTCSANDVPVPFHMENSNEDEEADILYRSGNDDHHYILSGVSLSNVSAHDEKKVAQSFISSFPYFVRIMKSFNVSGSYTLNIPYQFSMAHLPNCKIKIILHNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFIRGNNIKVGDICIFELVRECELRVRIAEVGKDGRDCQVGNVAMTRPSAGHAVSSKCMSMNPKVNSKCIRKVDLSDKKWSKIGQETILSIDLKKSSRASNTSKKMGLCPQSKAAHKKLAAPRRHRVEDELSSQAKAGLRMLFALDEQRVAQAFSSPFPSFVKIMKKFNVSGSYTLKIPYQFSAAHLPTYKTEVTLRNSRGGCWTVNSVPDAKGRTVHTFCGGWMAFVRDNDINFGDTCIFELVAQCEMQVYISGVGKEGLDHQNGHLKLTNRLANVPSTC 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00685 600 ProSiteProfiles B3 DNA-binding domain profile. 480 576 IPR003340 GO:0003677
Gma14g00685 600 CDD B3_DNA 253 347 IPR003340 GO:0003677
Gma14g00685 600 Gene3D - 236 351 IPR015300 -
Gma14g00685 600 Gene3D - 465 575 IPR015300 -
Gma14g00685 600 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 455 595 - -
Gma14g00685 600 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 1 454 - -
Gma14g00685 600 SMART B3_2 480 576 IPR003340 GO:0003677
Gma14g00685 600 SMART B3_2 255 351 IPR003340 GO:0003677
Gma14g00685 600 SMART B3_2 16 107 IPR003340 GO:0003677
Gma14g00685 600 CDD B3_DNA 21 105 IPR003340 GO:0003677
Gma14g00685 600 ProSiteProfiles B3 DNA-binding domain profile. 14 107 IPR003340 GO:0003677
Gma14g00685 600 Pfam B3 DNA binding domain 21 106 IPR003340 GO:0003677
Gma14g00685 600 Pfam B3 DNA binding domain 255 347 IPR003340 GO:0003677
Gma14g00685 600 Pfam B3 DNA binding domain 480 567 IPR003340 GO:0003677
Gma14g00685 600 ProSiteProfiles B3 DNA-binding domain profile. 255 351 IPR003340 GO:0003677
Gma14g00685 600 PANTHER B3 DOMAIN-CONTAINING 1 454 - -
Gma14g00685 600 PANTHER B3 DOMAIN-CONTAINING 455 595 - -
Gma14g00685 600 CDD B3_DNA 478 572 IPR003340 GO:0003677
Gma14g00685 600 SUPERFAMILY DNA-binding pseudobarrel domain 250 348 IPR015300 -
Gma14g00685 600 Gene3D - 8 109 IPR015300 -
Gma14g00685 600 SUPERFAMILY DNA-binding pseudobarrel domain 10 109 IPR015300 -
Gma14g00685 600 SUPERFAMILY DNA-binding pseudobarrel domain 473 574 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00685 Gma-Chr14 6774461 6778883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00685 13 347 B3 DNA Binding Superfamily AT3G18990 25.000 1.32e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma14g00685 B3 6.4e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00685 - - gmx:100814386 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00685 14 6774461 6778883 Gma14g00685 14 6774461 6778883 ECH
Gma17g02354 17 41555112 41558865 Gma14g00685 14 6774461 6778883 GST