Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00609 ATGTATACGAGCCAAGCCTTTTCTTCAGGGTCCTATGCGGATATGTTGTCTGGGAATCCTCTTTTACCTCATAACTACAGTGAAACTGTAGAAGGACAAAATGAGTTGAAGTTCATCACATCCATGAGGGACACAATGACTATGCAGCCTATTGATGGGCATTCCAATGCCGCCGCCACAGGTGATTCAGAGTCTTTTGTGAATGCTGGAGATTCCCATTCCCATGTTATTCCAAGGACAACACAATTGGGAGTTGTGGAGAGTGAGCAAAATGTACTGAACCAAGGCTTGTCTCTTAGCCTTGGCTCAGTGATGCCTTCTATTGCATCTGTCCCTACCTTTCCATATCAGTATCCCGGCACCAGTTTCTCTTCACTTATGACTGCTTGTATCCCAAATTCAAAGGACTCTTCATCTCATAAAGATGATGAGACCAGCCTACAAAGGGAATTGAGAAATGCTGAGTGCATGGCATCTTTAGCTTCTAGAGGATTTCACAAAAGGGAGGATTTGTATAATCCACATGCCTCAATGTGCATTAGTGAAGGCCGAAATGATGGATTGCAAGGTTTTTCCAACAATGTCTTGAACTCACAATACCTCAAGGCAGCACAGGAGTTGCTTGATGAAATAGTAAATGTCCGAAAGGCTTTGAAGCAAACTGGTTTGGAAAAGCAACAGAGTTTCCGTGATATTGGTTTAGATGGCTCCAAAGATTCAGATGGAAAATCTACCAGCCAATCCGTGCAGATATCTTCAGGCCCCAATGGTTCTGCTGCAAACTCTTCATGTGAGCTATCACCTGCAGAACGGCAGAATTTGTTGGACAAGAAGACAAAGCTTTTGTCAATGCTGGATGAGGTGGATAAAAGATACAGACAGTACTGCCACCAAATGCAGATTGTGGTGTCATCTTTTGATATGGTTGCTGGATGTGGAGCAGCTGAACCATACACTGCACTTGCCTTGCGCACAATATCGCGCCACTTTCGGTGTTTGCGCGATGCCATTAGCAGCCAAATTCAAGTGACTCAAAGGAACCTCGGAGAACAAGAGGGAATACCTCGTCTCCGCTATGTTGATCAGCAGCTTCGGCAACAAAAGGCCCTTCAGCAACTTGGTGTAATGAGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAACCTCTGTTTCAGTACTCCGTGCATGGCTCTTTGAGCATTTCCTTCATCCTTATCCTAAGGATTCAGAGAAAATTATGCTAGCAAGGCAAACTGGCTTAACAAGAAACCAGGTGGCAAACTGGTTCATTAATGCAAGGGTGCGTCTATGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAATTTGGTGATTCTGAGATGAGCAGCAATCTATTATCATCAGAGAACACACTCAAAGCTCCAAGAGATGATGTTCAAGCTTCTGACAATAAAAGGGAAGAGTCCCAGGACAACTTAATAAACGTTGATGATAGTGTTCAGCATCATGGGTTGAAGTTAGATCATGCCTCGGAATTGGACAGAGGGATCCAAAGCAGTGATCATGGAGAAAATGCCATGGATCCTAGAATTGGAAAATTGCAAGGTGACCAAAGGTTCAACATGAACAACAGCAATAACAATAGTCCTTATTATGGTGATGGCTGCGTAATGGCTTCTACTCCTGCCACATATGATTTACCAGAGTTAGGTAACATTGCTGTCGATGGCCACGTGTCGCTTGCATTGGAATTGAGGAACTGTGAAAGCCAAGGATTTGGTGTGTCAAATGATGACATGCATAAACGACATAAGAAAACATTGGCTTCTTCCCCAGAGACTGATTTGCTAGATTACCATTTCACAGACCCAGGAAAGCAACAAAACAAATTTGGCAATCCTCACCTATTGCACGAAGATCAAATGAACATAGCACAGATTTACTCTGTTCCGATTCAACTTTTTCAGTCTTCAAAAGCTGGAAGGTTGATGCTTTCGCTTGTTGTTTTATGGTCGGGGAAGGTTGGGGACCATGTTGTTTTTCTGTCATTTTCTACGTTGCCAATTTACTTGGCTTCCAAGATAGGGCAGAACAGAACACTGCAGCCTCATAGGTCTGAAATGTAG 2109 0.4362 MYTSQAFSSGSYADMLSGNPLLPHNYSETVEGQNELKFITSMRDTMTMQPIDGHSNAAATGDSESFVNAGDSHSHVIPRTTQLGVVESEQNVLNQGLSLSLGSVMPSIASVPTFPYQYPGTSFSSLMTACIPNSKDSSSHKDDETSLQRELRNAECMASLASRGFHKREDLYNPHASMCISEGRNDGLQGFSNNVLNSQYLKAAQELLDEIVNVRKALKQTGLEKQQSFRDIGLDGSKDSDGKSTSQSVQISSGPNGSAANSSCELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISSQIQVTQRNLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPETSVSVLRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMSSNLLSSENTLKAPRDDVQASDNKREESQDNLINVDDSVQHHGLKLDHASELDRGIQSSDHGENAMDPRIGKLQGDQRFNMNNSNNNSPYYGDGCVMASTPATYDLPELGNIAVDGHVSLALELRNCESQGFGVSNDDMHKRHKKTLASSPETDLLDYHFTDPGKQQNKFGNPHLLHEDQMNIAQIYSVPIQLFQSSKAGRLMLSLVVLWSGKVGDHVVFLSFSTLPIYLASKIGQNRTLQPHRSEM 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00609 702 SMART HOX_1 380 444 IPR001356 GO:0003677
Gma14g00609 702 MobiDBLite consensus disorder prediction 239 266 - -
Gma14g00609 702 MobiDBLite consensus disorder prediction 510 541 - -
Gma14g00609 702 ProSiteProfiles 'Homeobox' domain profile. 377 440 IPR001356 GO:0003677
Gma14g00609 702 Gene3D - 377 454 - -
Gma14g00609 702 MobiDBLite consensus disorder prediction 229 266 - -
Gma14g00609 702 MobiDBLite consensus disorder prediction 470 487 - -
Gma14g00609 702 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 601 - -
Gma14g00609 702 SUPERFAMILY Homeodomain-like 381 447 IPR009057 -
Gma14g00609 702 MobiDBLite consensus disorder prediction 454 469 - -
Gma14g00609 702 MobiDBLite consensus disorder prediction 453 489 - -
Gma14g00609 702 Pfam Homeobox KN domain 397 436 IPR008422 GO:0003677|GO:0006355
Gma14g00609 702 Pfam Associated with HOX 195 338 IPR006563 -
Gma14g00609 702 Coils Coil 201 221 - -
Gma14g00609 702 SMART prehox3 189 339 IPR006563 -
Gma14g00609 702 CDD homeodomain 380 441 IPR001356 GO:0003677
Gma14g00609 702 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 29 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00609 Gma-Chr14 5946798 5952070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00609 67 465 Homeobox Transcription Factor Family AT1G19700 49.881 3.08e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma14g00609 POX 5.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00609 - - gmx:100775682 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00609 14 5946798 5952070 Gma14g00609 14 5946798 5952070 ECH