Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00584 ATGGCTTTGGTTAACCTTTCTTACATCGGCATTGTGACCCTTATAACCCTTCTGGCTTCCACCGAGGCCAGGGTCCCGGGCGTGTACAGCGGCGGCGCGTGGGAGACCGCGCACGCCACGTTCTACGGCGGCAGCGACGCGTCGGGGACAATGGGCGGCGCGTGCGGGTACGGGAACCTGTACAGCCAGGGGTACGGCGTGAACACGGCGGCGCTGAGCACGGCGCTGTTCAACAACGGGCTGAGCTGCGGTGCCTGCTTCGAGATAAAGTGCGCGAACGACCCCAGCTGGTGCCACGCTGGCAGCCCCTCCATATTCGTAACCGCCACAAACTTCTGCCCCCCAAACTACGCCCTTCCGAACGACAATGGAGGGTGGTGCAATCCTCCCCGGCCCCACTTCGACCTGGCCATGCCCATGTTCCTCAAAATCGCTCAGTACCGCGCCGGCATCGTCCCCGTCTCTTACCGCAGGGTGCCTTGCCGTAAGCAGGGAGGGATGAGGTTCACGATCAACGGCTTCCGTTACTTCAACCTGGTTTTGATCACCAACGTCGCGGGCGCAGGGGATATCGTGAGGACGAGCGTGAAAGGGTCAAAGACTGGGTGGATGAGCATGAGCCGCAACTGGGGTCAGAACTGGCAGTCAAACGCTGTTCTGGTTGGTCAGTCACTCTCCTTCAGGGTCACAGCCAGTGACCGACGCACCTCCACCTCCTGGAACATTGTACCCGCCAATTGGCAATTTGGTCAAACATTCACCGCCAAAAATTTCAGAGTCTAA 783 0.599 MALVNLSYIGIVTLITLLASTEARVPGVYSGGAWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPSWCHAGSPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRRVPCRKQGGMRFTINGFRYFNLVLITNVAGAGDIVRTSVKGSKTGWMSMSRNWGQNWQSNAVLVGQSLSFRVTASDRRTSTSWNIVPANWQFGQTFTAKNFRV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00584 260 PANTHER EXPANSIN-A15 7 259 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Gma14g00584 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Gma14g00584 260 Gene3D - 167 258 IPR036749 -
Gma14g00584 260 SMART dpbb_1 69 156 IPR007112 -
Gma14g00584 260 SUPERFAMILY PHL pollen allergen 163 254 IPR036749 -
Gma14g00584 260 Pfam Lytic transglycolase 69 156 IPR009009 -
Gma14g00584 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Gma14g00584 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Gma14g00584 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Gma14g00584 260 PANTHER EXPANSIN-A6 7 259 - -
Gma14g00584 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Gma14g00584 260 Gene3D - 20 162 IPR036908 -
Gma14g00584 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00584 Gma-Chr14 5690498 5692459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00584 11 260 Expansin Gene Family AT2G39700 84.800 1.14e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00584 - - gmx:100809018 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02346 02 49524639 49526505 Gma14g00584 14 5690498 5692459 ECH
Gma18g01665 18 46708425 46713409 Gma14g00584 14 5690498 5692459 ECH
Gma07g01232 07 16060415 16064554 Gma14g00584 14 5690498 5692459 ECH
Gma11g01259 11 10732993 10735054 Gma14g00584 14 5690498 5692459 ECH
Gma12g00557 12 4664488 4666971 Gma14g00584 14 5690498 5692459 ECH
Gma13g03005 13 44534715 44536116 Gma14g00584 14 5690498 5692459 ECH
Gma14g00584 14 5690498 5692459 Gma14g00584 14 5690498 5692459 ECH
Gma14g00584 14 5690498 5692459 Gma02g02346 02 49524639 49526505 GST
Gma18g00357 18 3085445 3087144 Gma14g00584 14 5690498 5692459 PCT
Gma11g02218 11 37448228 37450037 Gma14g00584 14 5690498 5692459 PCT
Gma14g00584 14 5690498 5692459 Gma18g00357 18 3085445 3087144 PCT
Gma14g00584 14 5690498 5692459 Gma11g02218 11 37448228 37450037 PCT