Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00579 ATGGCCTCTTCTATTTCCTCTCTTTCTCTCCTTCTCCCTTCTCTCACAACCCTCATTCTCCTCCAAATTCAAACATGTGTCTCTTCATCACAAACACAAAAACCCCTCCTACTACCTCTCAAAACACAAACACAAACACCTCCACGCAAGCTTGCATTTCAGCACAACGTCACACTAACCATCTCACTAACCATAGGCTCGCCCCCACAGAACGTTACCATGGTCCTCGACACAGGCAGCGAACTCTCCTGGCTCCACTGCAAAAAACTCCCAAACCTAAACTCAACCTTCAACCCACTCCTCTCTTCTTCCTACACCCCAACCCCATGCAACTCTTCCGTCTGCATGACTCGAACCCGAGACCTCACTATCCCCGCTTCATGCGACCCCAACAACAAACTCTGCCACGTCATCGTCTCCTACGCCGACGCCTCCTCCGCCGAGGGCACCCTCGCCGCCGAAACCTTCTCCCTCGCCGGCGCCGCGCAACCAGGAACGTTATTCGGGTGCATGGACTCCGCTGGCTACACCTCCGACATCAACGAGGATGCTAAAACGACAGGTTTAATGGGCATGAACCGAGGCTCCCTCTCGCTGGTAACACAAATGGTGCTTCCGAAATTCTCGTACTGCATCTCGGGGGAGGACGCTTTCGGCGTCCTCCTCCTTGGCGACGGGCCTTCCGCGCCGTCGCCACTGCAGTACACCCCTCTAGTGACGGCGACAACCTCGTCGCCGTACTTCGACCGTGTCGCGTACACGGTCCAGCTCGAGGGGATTAAGGTTTCGGAGAAACTCCTGCAGCTTCCGAAGTCGGTGTTCGTGCCCGACCACACCGGAGCGGGTCAGACAATGGTGGATTCGGGTACCCAGTTTACTTTTCTCCTCGGGCCGGTTTACAATTCCCTAAAGGATGAGTTTTTGGAGCAGACGAAAGGGGTGCTGACCCGAATAGAGGATCCGAATTTCGTGTTTGAGGGGGCGATGGACCTGTGCTACCACGCGCCGGCGAGCTTGGCGGCGGTGCCGGCGGTGACGCTGGTGTTCTCGGGGGCGGAGATGAGGGTGTCAGGGGAGAGGCTGCTGTATAGGGTGAGTAAAGGGAGGGATTGGGTGTATTGCTTCACTTTTGGGAACTCTGATTTGTTGGGAATTGAAGCTTATGTGATTGGACATCATCATCAGCAGAACGTGTGGATGGAGTTTGATTTGGTCAAGTCTAGGGTAGGGTTCACTGAGACCACGTGTGACCTTGCCAGTCAACGGCTAGGATTCTCTCCTTAA 1284 0.5506 MASSISSLSLLLPSLTTLILLQIQTCVSSSQTQKPLLLPLKTQTQTPPRKLAFQHNVTLTISLTIGSPPQNVTMVLDTGSELSWLHCKKLPNLNSTFNPLLSSSYTPTPCNSSVCMTRTRDLTIPASCDPNNKLCHVIVSYADASSAEGTLAAETFSLAGAAQPGTLFGCMDSAGYTSDINEDAKTTGLMGMNRGSLSLVTQMVLPKFSYCISGEDAFGVLLLGDGPSAPSPLQYTPLVTATTSSPYFDRVAYTVQLEGIKVSEKLLQLPKSVFVPDHTGAGQTMVDSGTQFTFLLGPVYNSLKDEFLEQTKGVLTRIEDPNFVFEGAMDLCYHAPASLAAVPAVTLVFSGAEMRVSGERLLYRVSKGRDWVYCFTFGNSDLLGIEAYVIGHHHQQNVWMEFDLVKSRVGFTETTCDLASQRLGFSP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00579 427 PANTHER PROTEASE FAMILY PROTEIN, PUTATIVE-RELATED 7 425 - -
Gma14g00579 427 CDD pepsin_A_like_plant 58 416 IPR034161 -
Gma14g00579 427 Gene3D Acid Proteases 227 420 IPR021109 -
Gma14g00579 427 Pfam Xylanase inhibitor C-terminal 252 412 IPR032799 -
Gma14g00579 427 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 74 85 IPR001969 GO:0004190|GO:0006508
Gma14g00579 427 Gene3D Acid Proteases 50 224 IPR021109 -
Gma14g00579 427 Pfam Xylanase inhibitor N-terminal 61 225 IPR032861 -
Gma14g00579 427 SUPERFAMILY Acid proteases 60 417 IPR021109 -
Gma14g00579 427 ProSiteProfiles Peptidase family A1 domain profile. 59 412 IPR033121 -
Gma14g00579 427 PANTHER ASPARTYL PROTEASE-RELATED 7 425 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00579 Gma-Chr14 5573372 5574655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00579 63 417 Miscellaneous Gene Families AT1G77480 24.936 3.06e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00579 - - gmx:100789759 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02352 02 49613810 49614985 Gma14g00579 14 5573372 5574655 ECH
Gma18g01687 18 47332210 47333637 Gma14g00579 14 5573372 5574655 ECH
Gma07g01252 07 16295225 16296148 Gma14g00579 14 5573372 5574655 ECH
Gma14g00579 14 5573372 5574655 Gma14g00579 14 5573372 5574655 ECH